LICENSE.txt
MANIFEST.in
README.md
setup.cfg
setup.py
sarand/__init__.py
sarand/__main__.py
sarand/amr_neighborhood_in_contigs.py
sarand/annotation_visualization.py
sarand/config.py
sarand/extract_neighborhood.py
sarand/full_pipeline.py
sarand/new_extract_neighborhood.py
sarand/test_metacherchant.py
sarand/utils.py
sarand.egg-info/PKG-INFO
sarand.egg-info/SOURCES.txt
sarand.egg-info/dependency_links.txt
sarand.egg-info/entry_points.txt
sarand.egg-info/requires.txt
sarand.egg-info/top_level.txt
sarand.egg-info/zip-safe
sarand/data/CARD_AMR_seq.fasta
sarand/external/__init__.py
sarand/external/bakta.py
sarand/external/bandage.py
sarand/external/blastn.py
sarand/external/graph_aligner.py
sarand/external/rgi.py
sarand/model/__init__.py
sarand/model/fasta_seq.py
sarand/model/graph_alignment_output.py
sarand/util/__init__.py
sarand/util/file.py
sarand/util/logger.py
sarand/util/pkg.py