Metadata-Version: 1.0
Name: saboteurs
Version: 0.3.1
Summary: Identify agents impairing success accross experiments.
Home-page: https://github.com/Edinburgh-Genome-Foundry/saboteurs
Author: Zulko
Author-email: UNKNOWN
License: see LICENSE.txt
Description-Content-Type: UNKNOWN
Description: Saboteurs
        ==========
        
        Saboteurs is a Python library to detect bad elements (or *weakest links*)
        from success/failure data. It can also be used to design "test batches" which
        will allow to easily identify bad elements.
        
        We use it at the `Edinburgh Genome Foundry <http://genomefoundry.org/>`_ to
        identify defectuous genetic parts early:
        
        - When assembling large fragments of DNA, each with typically 5 to 25 parts, we
          observe that some assemblies have far fewer successes ("good clones") than
          some others. We use Saboteurs to identify possible parts which would be
          causing the damage. This would generally mean that the sample corresponding
          to these parts has been compromised.
        - Before launching a large batch of assemblies which reuse the same few parts,
          we use Saboteurs to design a smaller "test batch" of carefully selected
          assemblies to detect and identify possible bad parts.
        
        Infos
        -----
        
        **PIP installation:**
        
        .. code:: bash
        
          pip install saboteurs
        
        **Docs**
        
        `<https://edinburgh-genome-foundry.github.io/saboteurs/>`_
        
        **Github Page**
        
        `<https://github.com/Edinburgh-Genome-Foundry/saboteurs>`_
        
        **Web apps:**
        
        `Saboteurs detection <https://cuba.genomefoundry.org/find_saboteur_parts>`_
        
        `Batch design <https://cuba.genomefoundry.org/design_part_test_batches>`_
        
        
        **License:** MIT, Copyright Edinburgh Genome Foundry
        
        More biology software
        -----------------------
        
        .. image:: https://raw.githubusercontent.com/Edinburgh-Genome-Foundry/Edinburgh-Genome-Foundry.github.io/master/static/imgs/logos/egf-codon-horizontal.png
         :target: https://edinburgh-genome-foundry.github.io/
        
        Primavera is part of the `EGF Codons <https://edinburgh-genome-foundry.github.io/>`_ synthetic biology software suite for DNA design, manufacturing and validation.
        
Keywords: statistics weakest link DNA part validation
Platform: UNKNOWN
