rxncon2bngl.py
rxncon2boolnet.py
rxncon2reactiongraph.py
rxncon2regulatorygraph.py
rxncon2srgraph.py
setup.cfg
setup.py
rxncon/__init__.py
rxncon.egg-info/PKG-INFO
rxncon.egg-info/SOURCES.txt
rxncon.egg-info/dependency_links.txt
rxncon.egg-info/requires.txt
rxncon.egg-info/top_level.txt
rxncon/core/__init__.py
rxncon/core/contingency.py
rxncon/core/effector.py
rxncon/core/reaction.py
rxncon/core/rxncon_system.py
rxncon/core/spec.py
rxncon/core/state.py
rxncon/input/__init__.py
rxncon/input/excel_book/__init__.py
rxncon/input/excel_book/excel_book.py
rxncon/input/quick/__init__.py
rxncon/input/quick/quick.py
rxncon/input/sbtab/__init__.py
rxncon/input/sbtab/definitions.tsv
rxncon/input/sbtab/rxncon_Definition.tsv
rxncon/input/sbtab/sbtab.py
rxncon/input/shared/__init__.py
rxncon/input/shared/contingency_list.py
rxncon/input/shared/reaction_preprocess.py
rxncon/simulation/__init__.py
rxncon/simulation/boolean/__init__.py
rxncon/simulation/boolean/boolean_model.py
rxncon/simulation/boolean/boolnet_from_boolean_model.py
rxncon/simulation/ode/__init__.py
rxncon/simulation/ode/ode.py
rxncon/simulation/ode/polynomials.py
rxncon/simulation/rule_based/__init__.py
rxncon/simulation/rule_based/bngl_from_rule_based_model.py
rxncon/simulation/rule_based/rule_based_model.py
rxncon/test/__init__.py
rxncon/test/core/__init__.py
rxncon/test/core/test_effector.py
rxncon/test/core/test_reaction.py
rxncon/test/core/test_rxncon_system.py
rxncon/test/core/test_spec.py
rxncon/test/core/test_state.py
rxncon/test/input/__init__.py
rxncon/test/input/excel_book/__init__.py
rxncon/test/input/excel_book/additional_modifiers.xls
rxncon/test/input/excel_book/additional_rxns.xls
rxncon/test/input/excel_book/missing_necessary_sheet.xls
rxncon/test/input/excel_book/missing_unnecessary_sheet.xls
rxncon/test/input/excel_book/shuffled_columns.xls
rxncon/test/input/excel_book/test_excel_book.py
rxncon/test/input/quick/__init__.py
rxncon/test/input/quick/test_quick.py
rxncon/test/input/sbtab/Tiger_et_al_TableS1_SBtab_ContingencyID.tsv
rxncon/test/input/sbtab/Tiger_et_al_TableS1_SBtab_Gene.tsv
rxncon/test/input/sbtab/Tiger_et_al_TableS1_SBtab_Reaction.tsv
rxncon/test/input/sbtab/Tiger_et_al_TableS1_SBtab_ReactionID.tsv
rxncon/test/input/sbtab/__init__.py
rxncon/test/input/sbtab/definitions.tsv
rxncon/test/input/sbtab/rxncon_Definition.tsv
rxncon/test/input/sbtab/test_sbtab.py
rxncon/test/input/shared/__init__.py
rxncon/test/input/shared/test_contingency_list.py
rxncon/test/integration/__init__.py
rxncon/test/integration/cell_cycle/__init__.py
rxncon/test/integration/insulin/__init__.py
rxncon/test/integration/insulin/test_insulin_boolean.py
rxncon/test/integration/pheromone/__init__.py
rxncon/test/integration/pheromone/pheromone.xls
rxncon/test/integration/pheromone/pheromone_layout.xgmml
rxncon/test/integration/pheromone/test_pheromone_visualization.py
rxncon/test/simulation/__init__.py
rxncon/test/simulation/boolean/__init__.py
rxncon/test/simulation/boolean/test_boolean.py
rxncon/test/simulation/boolean/test_boolean_motifs.py
rxncon/test/simulation/boolean/utils.py
rxncon/test/simulation/ode/__init__.py
rxncon/test/simulation/ode/test_odes.py
rxncon/test/simulation/ode/test_polynomials.py
rxncon/test/simulation/rule_based/__init__.py
rxncon/test/simulation/rule_based/test_bngl_from_rule_based_model.py
rxncon/test/simulation/rule_based/test_rule_based_model.py
rxncon/test/util/__init__.py
rxncon/test/util/test_utils.py
rxncon/test/venntastic/__init__.py
rxncon/test/venntastic/test_sets.py
rxncon/test/visualization/__init__.py
rxncon/test/visualization/example_node_layout.xgmml
rxncon/test/visualization/test_file_existence.xgmml
rxncon/test/visualization/test_graphML.py
rxncon/test/visualization/test_reaction_graph.py
rxncon/test/visualization/test_regulatory_graph.py
rxncon/util/__init__.py
rxncon/util/utils.py
rxncon/venntastic/__init__.py
rxncon/venntastic/sets.py
rxncon/visualization/__init__.py
rxncon/visualization/graphML.py
rxncon/visualization/reaction_graph.py
rxncon/visualization/regulatory_graph.py