Implementation.md
MANIFEST.in
README.md
setup.py
RiboMiner/CoverageOfEachTrans.py
RiboMiner/EnrichmentAnalysis.py
RiboMiner/EnrichmentAnalysisForSingleTrans.py
RiboMiner/ExtractSequenceCenteredOnAPosition.py
RiboMiner/FunctionDefinition.py
RiboMiner/GCContent.py
RiboMiner/GetProteinCodingSequence.py
RiboMiner/GetUTRSequences.py
RiboMiner/LengthDistribution.py
RiboMiner/MergeSampleDensitys.py
RiboMiner/MetageneAnalysis.py
RiboMiner/MetageneAnalysisForTheWholeRegions.py
RiboMiner/ModifyHTseq.py
RiboMiner/OutputTranscriptInfo.py
RiboMiner/PausingScore.py
RiboMiner/Periodicity.py
RiboMiner/PlotEnrichmentRatio.py
RiboMiner/PlotGCContent.py
RiboMiner/PlotHydropathyCharge.py
RiboMiner/PlotMetageneAnalysis.py
RiboMiner/PlotMetageneAnalysisForTheWholeRegions.py
RiboMiner/PlotPolarity.py
RiboMiner/PlotRiboDensityAroundTriAAMotifs.py
RiboMiner/PlotRiboDensityAtEachKindAAOrCodon.py
RiboMiner/PlotTransCoverage.py
RiboMiner/PolarityCalculation.py
RiboMiner/ProcessPausingScore.py
RiboMiner/RPFdist.py
RiboMiner/ReadsLengthOfSpecificRegions.py
RiboMiner/RiboDensityAroundTripleteAAMotifs.py
RiboMiner/RiboDensityAtEachKindAAOrCodon.py
RiboMiner/RiboDensityAtEachPosition.py
RiboMiner/RiboDensityForSpecificRegion.py
RiboMiner/RiboDensityOfDiffFrames.py
RiboMiner/StatisticReadsOnDNAsContam.py
RiboMiner/__init__.py
RiboMiner/cAI.py
RiboMiner/cAIPlot.py
RiboMiner/enrichmentMeanDensity.py
RiboMiner/hydropathyCharge.py
RiboMiner/tAI.py
RiboMiner/tAIPlot.py
RiboMiner.egg-info/PKG-INFO
RiboMiner.egg-info/SOURCES.txt
RiboMiner.egg-info/dependency_links.txt
RiboMiner.egg-info/entry_points.txt
RiboMiner.egg-info/requires.txt
RiboMiner.egg-info/top_level.txt
data/AA_charge_index.txt
data/hg38.longest.transcripts.info.txt
data/hg38.transInfo.txt
data/hydropathy_index.txt
data/tRNA_GCNs_Saccharomyces cerevisiae.txt
data/tRNA_GCNs_fly.txt
data/tRNA_GCNs_human.txt
data/tRNA_GCNs_mouse.txt