MANIFEST.in
ez_setup.py
setup.py
divsufsort/config.h
divsufsort/divsufsort.c
divsufsort/divsufsort.h
divsufsort/divsufsort64.h
divsufsort/divsufsort_private.h
divsufsort/sssort.c
divsufsort/trsort.c
divsufsort/utils.c
probcons/CompareToRef.cc
probcons/Defaults.h
probcons/EvolutionaryTree.h
probcons/FileBuffer.h
probcons/FixRef.cc
probcons/MakeGnuPlot.cc
probcons/MultiSequence.h
probcons/ProbabilisticModel.h
probcons/Probcons.cc
probcons/ProjectPairwise.cc
probcons/SafeVector.h
probcons/ScoreType.h
probcons/Sequence.h
probcons/SparseMatrix.h
reveal/__init__.py
reveal/align.py
reveal/annotate.py
reveal/bubbles.py
reveal/chain.py
reveal/chop.py
reveal/comp.py
reveal/convert.py
reveal/extract.py
reveal/matches.py
reveal/merge.py
reveal/plot.py
reveal/refine.py
reveal/rem.py
reveal/reveal.py
reveal/schemes.py
reveal/split.py
reveal/stats.py
reveal/subgraph.py
reveal/transform.py
reveal/transformold.py
reveal/unzip.py
reveal/utils.py
reveal.egg-info/PKG-INFO
reveal.egg-info/SOURCES.txt
reveal.egg-info/dependency_links.txt
reveal.egg-info/entry_points.txt
reveal.egg-info/requires.txt
reveal.egg-info/top_level.txt
reveallib/interface.c
reveallib/reveal.c
reveallib/reveal.h