[ccpem_pipeliner.jobs]
combine_star_files_job = relion._parser.combine_star_job:ProcessStarFiles

[console_scripts]
combine_star_files.py = relion._parser.combine_star_files:main
external_job_fsc_fitting = relion.cryolo_relion_it.fsc_fitting_external_job:main
external_job_mask_soft_edge = relion.cryolo_relion_it.mask_soft_edge_external_job:main
external_job_reconstruct_halves = relion.cryolo_relion_it.reconstruct_halves_external_job:main
external_job_select_and_split = relion.cryolo_relion_it.select_and_split_external_job:main
relipy.job = relion.cli.current_job:run
relipy.link = relion.cli.project_linker:run
relipy.print_options = relion.cli.print_default_options:run
relipy.run_pipeline = relion.cli.run_pipeline:run
relipy.run_refine_pipeline = relion.cli.refine_pipeline:run
relipy.show = relion.cli.pipeline_viewer:run

[libtbx.precommit]
relion = relion

[workflows.services]
CTFFind = relion.zocalo.ctffind:CTFFind
CrYOLO = relion.zocalo.cryolo:CrYOLO
MotionCor = relion.zocalo.motioncorr:MotionCorr
RelionStopService = relion.zocalo.service:RelionStopService
TomoAlign = relion.zocalo.tomo_align:TomoAlign

[zocalo.services.images.plugins]
mrc_central_slice = relion.zocalo.images_service_plugin:mrc_central_slice
mrc_to_apng = relion.zocalo.images_service_plugin:mrc_to_apng
mrc_to_jpeg = relion.zocalo.images_service_plugin:mrc_to_jpeg
picked_particles = relion.zocalo.images_service_plugin:picked_particles

[zocalo.wrappers]
relion = relion.zocalo.wrapper:RelionWrapper
