Metadata-Version: 2.1
Name: receptor_utils
Version: 0.0.42
Summary: Some tools I find useful for working with Ig receptor sequences
Home-page: https://github.com/williamdlees/receptor_utils
Author: William Lees
Author-email: william@lees.org.uk
Project-URL: Bug Tracker, https://github.com/williamdlees/receptor_utils/issues
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: European Union Public Licence 1.2 (EUPL 1.2)
Classifier: Operating System :: OS Independent
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE

# receptor_utils

Some tools I find useful for working with Ig receptor sequences, including support for allele sequence naming and 
the creation of custom IgBlast databases. Please see the [documentation](https://williamdlees.github.io/receptor_utils/_build/html/introduction.html)
for further details.

Changes in version 0.0.42:
- better handling of long target sequences

Changes in version 0.0.41:
- annotate_j: fix issue with processing FASTA input

Changes in version 0.0.40:
- The submodule name receptor_utils.number_ighv has been changed to receptor_utils.number_v to reflect its wider scope. The old name will continue
to work for the time being but will raise a deprecation warning.
- In receptor_utils.simple_bio_seq, write_fasta(seqs, filename) has become write_fasta(filename, seqs) for consistency with write_csv. The old
calling pattern will continue to work for the time being but will raise a deprecation warning.

Changes in version 0.0.39:
- annotate_j and make_igblast_ndm will now accept a germline set in AIRR Community JSON format, as an alternative to providing the set in FASTA format.

Changes in version 0.0.38:
- Improve reporting of issues with conserved residues
- Change URL for fetching IMGT reference sets to use https





