MANIFEST.in
README.md
license.txt
pyproject.toml
setup.cfg
src/digger/__init__.py
src/digger/blastresults_to_csv.py
src/digger/calc_motifs.py
src/digger/cirelli_contig_matches.py
src/digger/cirelli_to_fasta.py
src/digger/compare_annotations.py
src/digger/dig_sequence.py
src/digger/dig_utils.py
src/digger/digger.py
src/digger/find_alignments.py
src/digger/motif.py
src/digger/parse_genes.py
src/digger/parse_imgt_annotations.py
src/digger/search_motifs.py
src/digger/setup_motif_params.py
src/digger/slugify.py
src/digger/motifs/human/IGH/3'D-HEPTAMER_prob.csv
src/digger/motifs/human/IGH/3'D-NONAMER_prob.csv
src/digger/motifs/human/IGH/5'D-HEPTAMER_prob.csv
src/digger/motifs/human/IGH/5'D-NONAMER_prob.csv
src/digger/motifs/human/IGH/J-HEPTAMER_prob.csv
src/digger/motifs/human/IGH/J-NONAMER_prob.csv
src/digger/motifs/human/IGH/L-PART1_1_48_prob.csv
src/digger/motifs/human/IGH/L-PART1_2_48_prob.csv
src/digger/motifs/human/IGH/L-PART1_3_48_prob.csv
src/digger/motifs/human/IGH/L-PART1_4_48_prob.csv
src/digger/motifs/human/IGH/L-PART1_5_51_prob.csv
src/digger/motifs/human/IGH/L-PART1_6_63_prob.csv
src/digger/motifs/human/IGH/L-PART2_1_11_prob.csv
src/digger/motifs/human/IGH/OCTAMER_prob.csv
src/digger/motifs/human/IGH/V-HEPTAMER_prob.csv
src/digger/motifs/human/IGH/V-NONAMER_prob.csv
src/digger/motifs/human/IGH/conserved_motifs.fasta
src/digger/motifs/human/IGH/motif_params.json
src/digger/motifs/human/IGK/J-HEPTAMER_prob.csv
src/digger/motifs/human/IGK/J-NONAMER_prob.csv
src/digger/motifs/human/IGK/L-PART1_1_48_prob.csv
src/digger/motifs/human/IGK/L-PART1_2_57_prob.csv
src/digger/motifs/human/IGK/L-PART1_3_51_prob.csv
src/digger/motifs/human/IGK/L-PART1_4_51_prob.csv
src/digger/motifs/human/IGK/L-PART1_5_51_prob.csv
src/digger/motifs/human/IGK/L-PART1_6_51_prob.csv
src/digger/motifs/human/IGK/L-PART1_prob.csv
src/digger/motifs/human/IGK/L-PART2_1_11_prob.csv
src/digger/motifs/human/IGK/L-PART2_prob.csv
src/digger/motifs/human/IGK/OCTAMER_prob.csv
src/digger/motifs/human/IGK/V-HEPTAMER_prob.csv
src/digger/motifs/human/IGK/V-NONAMER_prob.csv
src/digger/motifs/human/IGK/conserved_motifs.fasta
src/digger/motifs/human/IGK/motif_params.json
src/digger/motifs/human/IGL/J-HEPTAMER_prob.csv
src/digger/motifs/human/IGL/J-NONAMER_prob.csv
src/digger/motifs/human/IGL/L-PART1_1_42_prob.csv
src/digger/motifs/human/IGL/L-PART1_2_47_prob.csv
src/digger/motifs/human/IGL/L-PART1_3_48_prob.csv
src/digger/motifs/human/IGL/L-PART1_4_48_prob.csv
src/digger/motifs/human/IGL/L-PART1_5_48_prob.csv
src/digger/motifs/human/IGL/L-PART1_6_48_prob.csv
src/digger/motifs/human/IGL/L-PART1_7_49_prob.csv
src/digger/motifs/human/IGL/L-PART1_8_51_prob.csv
src/digger/motifs/human/IGL/L-PART1_9_54_prob.csv
src/digger/motifs/human/IGL/L-PART2_1_11_prob.csv
src/digger/motifs/human/IGL/OCTAMER_prob.csv
src/digger/motifs/human/IGL/V-HEPTAMER_prob.csv
src/digger/motifs/human/IGL/V-NONAMER_prob.csv
src/digger/motifs/human/IGL/conserved_motifs.fasta
src/digger/motifs/human/IGL/motif_params.json
src/digger/motifs/human/TRA/IMGT000024_genes_lpart1.csv
src/digger/motifs/human/TRA/IMGT000024_genes_lpart2.csv
src/digger/motifs/human/TRA/J-HEPTAMER_prob.csv
src/digger/motifs/human/TRA/J-NONAMER_prob.csv
src/digger/motifs/human/TRA/L-PART1_10_51_prob.csv
src/digger/motifs/human/TRA/L-PART1_11_51_prob.csv
src/digger/motifs/human/TRA/L-PART1_12_51_prob.csv
src/digger/motifs/human/TRA/L-PART1_13_51_prob.csv
src/digger/motifs/human/TRA/L-PART1_14_54_prob.csv
src/digger/motifs/human/TRA/L-PART1_15_54_prob.csv
src/digger/motifs/human/TRA/L-PART1_16_54_prob.csv
src/digger/motifs/human/TRA/L-PART1_17_54_prob.csv
src/digger/motifs/human/TRA/L-PART1_18_57_prob.csv
src/digger/motifs/human/TRA/L-PART1_1_42_prob.csv
src/digger/motifs/human/TRA/L-PART1_2_42_prob.csv
src/digger/motifs/human/TRA/L-PART1_3_45_prob.csv
src/digger/motifs/human/TRA/L-PART1_4_45_prob.csv
src/digger/motifs/human/TRA/L-PART1_5_45_prob.csv
src/digger/motifs/human/TRA/L-PART1_6_48_prob.csv
src/digger/motifs/human/TRA/L-PART1_7_48_prob.csv
src/digger/motifs/human/TRA/L-PART1_8_48_prob.csv
src/digger/motifs/human/TRA/L-PART1_9_48_prob.csv
src/digger/motifs/human/TRA/L-PART2_1_32_prob.csv
src/digger/motifs/human/TRA/L-PART2_2_8_prob.csv
src/digger/motifs/human/TRA/L-PART2_3_11_prob.csv
src/digger/motifs/human/TRA/L-PART2_4_14_prob.csv
src/digger/motifs/human/TRA/L-PART2_5_26_prob.csv
src/digger/motifs/human/TRA/V-HEPTAMER_prob.csv
src/digger/motifs/human/TRA/V-NONAMER_prob.csv
src/digger/motifs/human/TRA/motif_params.json
src/digger/motifs/human/TRB/3'D-HEPTAMER_prob.csv
src/digger/motifs/human/TRB/3'D-NONAMER_prob.csv
src/digger/motifs/human/TRB/5'D-HEPTAMER_prob.csv
src/digger/motifs/human/TRB/5'D-NONAMER_prob.csv
src/digger/motifs/human/TRB/J-HEPTAMER_prob.csv
src/digger/motifs/human/TRB/J-NONAMER_prob.csv
src/digger/motifs/human/TRB/L-PART1_1_36_prob.csv
src/digger/motifs/human/TRB/L-PART1_2_81_prob.csv
src/digger/motifs/human/TRB/L-PART1_3_51_prob.csv
src/digger/motifs/human/TRB/L-PART1_4_51_prob.csv
src/digger/motifs/human/TRB/L-PART1_5_51_prob.csv
src/digger/motifs/human/TRB/L-PART1_6_51_prob.csv
src/digger/motifs/human/TRB/L-PART1_7_52_prob.csv
src/digger/motifs/human/TRB/L-PART1_8_60_prob.csv
src/digger/motifs/human/TRB/L-PART1_9_63_prob.csv
src/digger/motifs/human/TRB/L-PART2_1_8_prob.csv
src/digger/motifs/human/TRB/L-PART2_2_11_prob.csv
src/digger/motifs/human/TRB/V-HEPTAMER_prob.csv
src/digger/motifs/human/TRB/V-NONAMER_prob.csv
src/digger/motifs/human/TRB/motif_params.json
src/digger/motifs/human/TRD/3'D-HEPTAMER_prob.csv
src/digger/motifs/human/TRD/3'D-NONAMER_prob.csv
src/digger/motifs/human/TRD/5'D-HEPTAMER_prob.csv
src/digger/motifs/human/TRD/5'D-NONAMER_prob.csv
src/digger/motifs/human/TRD/J-HEPTAMER_prob.csv
src/digger/motifs/human/TRD/J-NONAMER_prob.csv
src/digger/motifs/human/TRD/L-PART1_1_48_prob.csv
src/digger/motifs/human/TRD/L-PART1_2_51_prob.csv
src/digger/motifs/human/TRD/L-PART2_1_11_prob.csv
src/digger/motifs/human/TRD/L-PART2_2_14_prob.csv
src/digger/motifs/human/TRD/V-HEPTAMER_prob.csv
src/digger/motifs/human/TRD/V-NONAMER_prob.csv
src/digger/motifs/human/TRD/motif_params.json
src/digger/motifs/human/TRG/J-HEPTAMER_prob.csv
src/digger/motifs/human/TRG/J-NONAMER_prob.csv
src/digger/motifs/human/TRG/L-PART1_1_48_prob.csv
src/digger/motifs/human/TRG/L-PART1_2_45_prob.csv
src/digger/motifs/human/TRG/L-PART2_1_11_prob.csv
src/digger/motifs/human/TRG/L-PART2_2_14_prob.csv
src/digger/motifs/human/TRG/V-HEPTAMER_prob.csv
src/digger/motifs/human/TRG/V-NONAMER_prob.csv
src/digger/motifs/human/TRG/motif_params.json
src/digger/motifs/rhesus_macaque/IGH/3'D-HEPTAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGH/3'D-NONAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGH/5'D-HEPTAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGH/5'D-NONAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGH/J-HEPTAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGH/J-NONAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART1_1_48_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART1_2_48_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART1_3_48_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART1_4_48_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART1_5_51_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART1_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART2_1_17_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART2_2_11_prob.csv
src/digger/motifs/rhesus_macaque/IGH/L-PART2_prob.csv
src/digger/motifs/rhesus_macaque/IGH/V-HEPTAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGH/V-NONAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGH/conserved_motifs.fasta
src/digger/motifs/rhesus_macaque/IGH/motif_params.json
src/digger/motifs/rhesus_macaque/IGK/J-HEPTAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGK/J-NONAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGK/L-PART1_1_57_prob.csv
src/digger/motifs/rhesus_macaque/IGK/L-PART1_2_51_prob.csv
src/digger/motifs/rhesus_macaque/IGK/L-PART1_3_51_prob.csv
src/digger/motifs/rhesus_macaque/IGK/L-PART1_4_51_prob.csv
src/digger/motifs/rhesus_macaque/IGK/L-PART1_5_51_prob.csv
src/digger/motifs/rhesus_macaque/IGK/L-PART2_1_11_prob.csv
src/digger/motifs/rhesus_macaque/IGK/V-HEPTAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGK/V-NONAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGK/conserved_motifs.fasta
src/digger/motifs/rhesus_macaque/IGK/motif_params.json
src/digger/motifs/rhesus_macaque/IGL/J-HEPTAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGL/J-NONAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_1_39_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_2_42_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_3_45_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_4_48_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_5_48_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_6_48_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_7_48_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_8_51_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART1_9_57_prob.csv
src/digger/motifs/rhesus_macaque/IGL/L-PART2_1_11_prob.csv
src/digger/motifs/rhesus_macaque/IGL/V-HEPTAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGL/V-NONAMER_prob.csv
src/digger/motifs/rhesus_macaque/IGL/conserved_motifs.fasta
src/digger/motifs/rhesus_macaque/IGL/motif_params.json
src/receptor_digger.egg-info/PKG-INFO
src/receptor_digger.egg-info/SOURCES.txt
src/receptor_digger.egg-info/dependency_links.txt
src/receptor_digger.egg-info/entry_points.txt
src/receptor_digger.egg-info/requires.txt
src/receptor_digger.egg-info/top_level.txt