Metadata-Version: 1.1
Name: ratschlab_common
Version: 0.2.0
Summary: Small library of common functionalities used in various projects in the ratschlab
Home-page: https://github.com/ratschlab/ratschlab-common
Author: ETH Zurich, Biomedical Informatics Group
Author-email: marc.zimmermann@inf.ethz.ch
License: MIT license
Description: ================
        ratschlab common
        ================
        
        ..
           
           .. image:: https://img.shields.io/pypi/v/ratschlab_common.svg
                   :target: https://pypi.python.org/pypi/ratschlab_common
        
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                   :target: https://ratschlab-common.readthedocs.io/en/latest/?badge=latest
                   :alt: Documentation Status
        
        
        Small library of common code used in various projects in the `ratschlab
        <http://www.ratschlab.org>`_.  
        
        * Free software: MIT license
        
        
        Features
        --------
        
        * Writing parquet and HDF5 files with sensible defaults.
        * Support for working with 'chunkfiles', i.e. splitting up a large dataset in smaller chunks which can be processed independently:
        
          * Repartition records (i.e. increase or decrease number of chunkfiles) while keeping data belonging together in the same file (e.g. data with the same patient id associated)
          * simple indexing for looking up in which chunk to find data belonging e.g. to a patient
        
        * bigmatrix: support for creating and reading large matrices stored in HDF5 having additional metadata on the axes in form of data frames.
        
        
        
        
        
        
        
Keywords: ratschlab_common
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
