LICENSE
README.md
ragtag.py
ragtag_agp2fa.py
ragtag_agpcheck.py
ragtag_asmstats.py
ragtag_break_query.py
ragtag_correct.py
ragtag_create_links.py
ragtag_delta2paf.py
ragtag_merge.py
ragtag_paf2delta.py
ragtag_patch.py
ragtag_rename.py
ragtag_scaffold.py
ragtag_splitasm.py
ragtag_stats.py
ragtag_update_gff.py
setup.py
RagTag.egg-info/PKG-INFO
RagTag.egg-info/SOURCES.txt
RagTag.egg-info/dependency_links.txt
RagTag.egg-info/requires.txt
RagTag.egg-info/top_level.txt
RagTag.egg-info/zip-safe
ragtag_utilities/AGPFile.py
ragtag_utilities/Aligner.py
ragtag_utilities/AlignmentReader.py
ragtag_utilities/ContigAlignment.py
ragtag_utilities/RestrictionFragmentMap.py
ragtag_utilities/ScaffoldGraph.py
ragtag_utilities/__init__.py
ragtag_utilities/utilities.py