numpy>=1.20.0
scipy>=1.7.0
scikit-learn>=1.0.0
pandas>=1.3.0
scanpy>=1.9.0
joblib>=1.0.0
tqdm>=4.60.0

[dev]
pytest>=7.0.0
pytest-cov>=3.0.0
jupyter>=1.0.0
matplotlib>=3.5.0
black>=22.0.0
ruff>=0.1.0
build>=1.0.0
twine>=4.0.0

[docs]
sphinx>=4.5.0
pydata-sphinx-theme>=0.13.0
sphinx-autodoc-typehints>=1.12.0
sphinxcontrib-napoleon>=0.7
myst-parser>=0.18.0
sphinx-autobuild>=2021.3.14

[docs:python_version < "3.11"]
tomli>=1.0.0

[spatial]
anndata>=0.8.0
spatialdata>=0.1.0

[test]
pytest>=7.0.0
pytest-cov>=3.0.0
pytest-xdist>=3.0.0
