LICENSE
MANIFEST.in
README.md
setup.py
Qasim.egg-info/PKG-INFO
Qasim.egg-info/SOURCES.txt
Qasim.egg-info/dependency_links.txt
Qasim.egg-info/top_level.txt
cython/genreads.c
cython/qasim.c
cython/qasim.pyx
qasim/__init__.py
scripts/qasim_cli.py
tests/__init__.py
tests/qasim_test.py
tests/testutil.py
tests/resources/R1.qp.xml
tests/resources/R2.qp.xml
tests/resources/empty.vcf
tests/resources/germline.vcf
tests/resources/indel.vcf.1
tests/resources/mutagen_result.sequence
tests/resources/mutagen_result.vcf
tests/resources/somatic.vcf
tests/resources/test.30x.1.fq
tests/resources/test.30x.2.fq
tests/resources/test.60x.1.fq
tests/resources/test.60x.2.fq
tests/resources/test.fa.0
tests/resources/test.fa.1
tests/resources/test.fa.2
tests/resources/test.fa.A
tests/resources/test.fa.C
tests/resources/test.fa.G
tests/resources/test.fa.T
tests/resources/test.simple.1.fq
tests/resources/test.vcf.0
tests/resources/test.vcf.1
tests/resources/test.vcf.2
tests/resources/test.vcf.3_1
tests/resources/test.vcf.3_2
tests/resources/test.vcf.4