from cli import QAProtocolCLI
from .version import __version__

# pcp_qap package

#import qclib, \
#       workflows

#__all__ = ['qclib', 'workflows']
'''
from cli import QAProtocolCLI
from anatomical_preproc import run_anatomical_reorient, \
                               run_anatomical_skullstrip, \
                               run_segmentation_workflow

from functional_preproc import run_func_motion_correct, \
                               run_functional_brain_mask, \
                               run_mean_functional


__all__ = ['dl_subj_from_s3', \
           'upl_qap_output', \
           'remove_zero_variance_voxels', \
           'load', \
           'robust_stdev', \
           'ar_nitime', \
           'ar_statsmodels', \
           'ar1', \
           'calc_dvars', \
           'calc_mean_dvars', \
           'mean_dvars_wrapper'
           'load_image', \
           'load_mask', \
           'summary_mask', \
           'get_background', \
           'check_datatype', \
           'snr', \
           'cnr', \
           'fber', \
           'efc', \
           'artifacts', \
           'fwhm', \
           'ghost_direction', \
           'ghost_all', \
           'fd_jenkinson', \
           'summarize_fd', \
           'outlier_timepoints', \
           'mean_outlier_timepoints', \
           'quality_timepoints', \
           'mean_quality_timepoints'
           'anatomical_reorient_workflow', \
           'anatomical_skullstrip_workflow', \
           'flirt_anatomical_linear_registration', \
           'ants_anatomical_linear_registration', \
           'segmentation_workflow', \
           'ants_lin_reg', \
           'separate_warps_list', \
           'pick_seg_type', \
           'get_idx', \
           'func_motion_correct_workflow', \
           'functional_brain_mask_workflow', \
           'mean_functional_workflow', \
           'run_mean_functional', \
           'select_thresh', \
           'c3d_affine_convert', \
           'slice_head_mask', \
           'qap_anatomical_spatial', \
           'qap_functional_spatial', \
           'qap_functional_temporal', \
           'append_to_csv', \
           'qap_mask_workflow', \
           'qap_spatial_workflow', \
           'qap_spatial_epi_workflow', \
           'qap_temporal_workflow', \
           'check_input_resources', \
           'check_config_settings']

'''
