#!/usr/bin/env python3

# 2024 (c) Micha Johannes Birklbauer
# https://github.com/michabirklbauer/
# micha.birklbauer@gmail.com

__all__ = [
    "modifications_to_str",
    "assert_data_type_same",
    "get_available_keys",
    "filter_target_decoy",
    "filter_proteins",
    "filter_protein_distribution",
    "filter_crosslink_type",
    "filter_peptide_pair_distribution",
    "summary",
    "unique",
    "aggregate",
    "validate",
    "to_proforma",
    "to_dataframe",
    "from_dataframe",
    "targets_only",
    "fasta_title_to_accession",
    "reannotate_positions",
    "intersection",
    "annotate_fdr",
]

from .util import modifications_to_str
from .util import assert_data_type_same
from .util import get_available_keys
from .filter import filter_target_decoy
from .filter import filter_proteins
from .filter import filter_protein_distribution
from .filter import filter_crosslink_type
from .filter import filter_peptide_pair_distribution
from .summary import summary
from .aggregate import unique
from .aggregate import aggregate
from .validate import validate
from .to_proforma import to_proforma
from .to_dataframe import to_dataframe
from .from_dataframe import from_dataframe
from .targets_only import targets_only
from .reannotate_positions import fasta_title_to_accession
from .reannotate_positions import reannotate_positions
from .intersection import intersection
from .annotate_fdr import annotate_fdr
