LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.py
VLMP/VLMP.py
VLMP/__init__.py
VLMP/__main__.py
VLMP/components/__init__.py
VLMP/components/ensembles/NVT.py
VLMP/components/ensembles/NVTlambda.py
VLMP/components/ensembles/__init__.py
VLMP/components/integrators/BBK.py
VLMP/components/integrators/EulerMaruyama.py
VLMP/components/integrators/EulerMaruyamaRigidBody.py
VLMP/components/integrators/EulerMaruyamaRigidBodyPatchesState.py
VLMP/components/integrators/GJF.py
VLMP/components/integrators/MagneticBrownian.py
VLMP/components/integrators/__init__.py
VLMP/components/modelExtensions/ACMagneticField.py
VLMP/components/modelExtensions/AFM.py
VLMP/components/modelExtensions/UniformField.py
VLMP/components/modelExtensions/__init__.py
VLMP/components/modelExtensions/absortionSurface.py
VLMP/components/modelExtensions/addBond.py
VLMP/components/modelExtensions/constantForce.py
VLMP/components/modelExtensions/constantForceBetweenCentersOfMass.py
VLMP/components/modelExtensions/constantForceOverCenterOfMass.py
VLMP/components/modelExtensions/constantTorqueBetweenCentersOfMass.py
VLMP/components/modelExtensions/constantTorqueOverCenterOfMass.py
VLMP/components/modelExtensions/constraintCenterOfMassPosition.py
VLMP/components/modelExtensions/constraintParticlesPosition.py
VLMP/components/modelExtensions/harmonicBondBetweenCentersOfMass.py
VLMP/components/modelExtensions/interLennardJones.py
VLMP/components/modelExtensions/intraSteric.py
VLMP/components/modelExtensions/sphericalShell.py
VLMP/components/modelExtensions/surface.py
VLMP/components/modelExtensions/surfaceMaxForce.py
VLMP/components/modelOperations/__init__.py
VLMP/components/modelOperations/alignInertiaMomentAlongVector.py
VLMP/components/modelOperations/distributeRandomly.py
VLMP/components/modelOperations/rotation.py
VLMP/components/modelOperations/setCenterOfMassPosition.py
VLMP/components/modelOperations/setContactDistance.py
VLMP/components/modelOperations/setParticleLowestPosition.py
VLMP/components/modelOperations/setParticlePositions.py
VLMP/components/models/CORONAVIRUS.py
VLMP/components/models/CORONAVIRUS_MESH.py
VLMP/components/models/FILE.py
VLMP/components/models/HELIX.py
VLMP/components/models/ICOSPHERE.py
VLMP/components/models/KB.py
VLMP/components/models/LEMON.py
VLMP/components/models/MADna.py
VLMP/components/models/MAGNETICNP.py
VLMP/components/models/PARTICLE.py
VLMP/components/models/SBCG.py
VLMP/components/models/SIMULATION.py
VLMP/components/models/SOP.py
VLMP/components/models/SPHEREMULTIBLOB.py
VLMP/components/models/TUBE.py
VLMP/components/models/WLC.py
VLMP/components/models/__init__.py
VLMP/components/models/data/CORONAVIRUS.json
VLMP/components/models/data/ICOSPHERE.json
VLMP/components/models/data/MADna.json
VLMP/components/simulationSteps/AFMMaxForce.py
VLMP/components/simulationSteps/__init__.py
VLMP/components/simulationSteps/afmMeasurement.py
VLMP/components/simulationSteps/centerOfMassMeasurement.py
VLMP/components/simulationSteps/heightMeasurement.py
VLMP/components/simulationSteps/info.py
VLMP/components/simulationSteps/meanMagnetizationMeasurement.py
VLMP/components/simulationSteps/meanRadius.py
VLMP/components/simulationSteps/nativeContactsMeasurement.py
VLMP/components/simulationSteps/patchPolymersMeasurement.py
VLMP/components/simulationSteps/potentialEnergyMeasurement.py
VLMP/components/simulationSteps/potentialMeasurement.py
VLMP/components/simulationSteps/savePatchyParticlesState.py
VLMP/components/simulationSteps/saveState.py
VLMP/components/simulationSteps/stressMeasurement.py
VLMP/components/simulationSteps/thermodynamicIntegration.py
VLMP/components/simulationSteps/thermodynamicMeasurement.py
VLMP/components/simulationSteps/vqcmMeasurement.py
VLMP/components/systems/__init__.py
VLMP/components/systems/backup.py
VLMP/components/systems/simulationName.py
VLMP/components/types/__init__.py
VLMP/components/types/basic.py
VLMP/components/types/none.py
VLMP/components/units/KcalMol_A.py
VLMP/components/units/__init__.py
VLMP/components/units/none.py
VLMP/experiments/HighThroughputAFM.py
VLMP/experiments/SurfaceUmbrellaSampling.py
VLMP/experiments/__init__.py
VLMP/utils/__init__.py
VLMP/utils/geometry/__init__.py
VLMP/utils/geometry/bounds.py
VLMP/utils/geometry/particlesDistribution.py
VLMP/utils/input/__init__.py
VLMP/utils/launcher/__init__.py
VLMP/utils/selections/__init__.py
VLMP/utils/units/__init__.py
pyVLMP.egg-info/PKG-INFO
pyVLMP.egg-info/SOURCES.txt
pyVLMP.egg-info/dependency_links.txt
pyVLMP.egg-info/requires.txt
pyVLMP.egg-info/top_level.txt