LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
bin/pytoda-filter-invalid-smi
pytoda/__init__.py
pytoda/data_splitter.py
pytoda/files.py
pytoda/transforms.py
pytoda/types.py
pytoda/warnings.py
pytoda.egg-info/PKG-INFO
pytoda.egg-info/SOURCES.txt
pytoda.egg-info/dependency_links.txt
pytoda.egg-info/requires.txt
pytoda.egg-info/top_level.txt
pytoda/datasets/__init__.py
pytoda/datasets/_cache_datasource.py
pytoda/datasets/_csv_eager_dataset.py
pytoda/datasets/_csv_lazy_dataset.py
pytoda/datasets/_csv_statistics.py
pytoda/datasets/_fasta_eager_dataset.py
pytoda/datasets/_fasta_lazy_dataset.py
pytoda/datasets/_smi_eager_dataset.py
pytoda/datasets/_smi_lazy_dataset.py
pytoda/datasets/_table_dataset.py
pytoda/datasets/annotated_dataset.py
pytoda/datasets/base_dataset.py
pytoda/datasets/dataframe_dataset.py
pytoda/datasets/distributional_dataset.py
pytoda/datasets/drug_affinity_dataset.py
pytoda/datasets/drug_sensitivity_dataset.py
pytoda/datasets/drug_sensitivity_dose_dataset.py
pytoda/datasets/gene_expression_dataset.py
pytoda/datasets/polymer_dataset.py
pytoda/datasets/protein_protein_interaction_dataset.py
pytoda/datasets/protein_sequence_dataset.py
pytoda/datasets/set_matching_dataset.py
pytoda/datasets/smiles_dataset.py
pytoda/datasets/tests/__init__.py
pytoda/datasets/tests/test_annotated_dataset.py
pytoda/datasets/tests/test_base_dataset.py
pytoda/datasets/tests/test_distributional_dataset.py
pytoda/datasets/tests/test_drug_affinity_dataset.py
pytoda/datasets/tests/test_drug_sensitivity_dataset.py
pytoda/datasets/tests/test_drug_sensitivity_dose_dataset.py
pytoda/datasets/tests/test_gene_expression_dataset.py
pytoda/datasets/tests/test_polymer_dataset.py
pytoda/datasets/tests/test_protein_protein_interaction_dataset.py
pytoda/datasets/tests/test_protein_sequence_dataset.py
pytoda/datasets/tests/test_set_matching_dataset.py
pytoda/datasets/tests/test_smiles_datasets.py
pytoda/datasets/utils/__init__.py
pytoda/datasets/utils/background_tensors.py
pytoda/datasets/utils/factories.py
pytoda/datasets/utils/utils.py
pytoda/datasets/utils/wrappers.py
pytoda/preprocessing/__init__.py
pytoda/preprocessing/crawlers.py
pytoda/preprocessing/smi.py
pytoda/preprocessing/tests/__init__.py
pytoda/preprocessing/tests/test_crawlers.py
pytoda/preprocessing/tests/test_smi.py
pytoda/proteins/__init__.py
pytoda/proteins/processing.py
pytoda/proteins/protein_feature_language.py
pytoda/proteins/protein_language.py
pytoda/proteins/transforms.py
pytoda/proteins/utils.py
pytoda/proteins/tests/__init__.py
pytoda/proteins/tests/test_processing.py
pytoda/proteins/tests/test_protein_feature_language.py
pytoda/proteins/tests/test_protein_language.py
pytoda/proteins/tests/test_utils.py
pytoda/smiles/__init__.py
pytoda/smiles/polymer_language.py
pytoda/smiles/processing.py
pytoda/smiles/smiles_language.py
pytoda/smiles/transforms.py
pytoda/smiles/metadata/ATTRIBUTION
pytoda/smiles/metadata/README.md
pytoda/smiles/metadata/__init__.py
pytoda/smiles/metadata/spe_chembl.txt
pytoda/smiles/metadata/tokenizer/README.txt
pytoda/smiles/metadata/tokenizer/token_count.json
pytoda/smiles/metadata/tokenizer/tokenizer_config.json
pytoda/smiles/metadata/tokenizer/vocab.json
pytoda/smiles/tests/__init__.py
pytoda/smiles/tests/test_polymer_language.py
pytoda/smiles/tests/test_processing.py
pytoda/smiles/tests/test_smiles_language.py
pytoda/smiles/tests/test_transforms.py
pytoda/tests/__init__.py
pytoda/tests/test_data_splitter.py
pytoda/tests/test_files.py
pytoda/tests/test_transforms.py
pytoda/tests/utils.py