LICENSE
MANIFEST.in
README.md
Run_dots_counting.py
add_coords_to_experimental_metadata.py
apply_stitching.py
dots_coords_correction.py
preprocessing_script.py
process_standalone_experiment.py
reference_registration.py
setup.py
staining_segmentation.py
pysmFISH/__init__.py
pysmFISH/_version.py
pysmFISH/counting.py
pysmFISH/dots_calling.py
pysmFISH/dots_coords_calculations.py
pysmFISH/filtering.py
pysmFISH/hdf5_utils.py
pysmFISH/io.py
pysmFISH/object_based_segmentation.py
pysmFISH/utils.py
pysmFISH.egg-info/PKG-INFO
pysmFISH.egg-info/SOURCES.txt
pysmFISH.egg-info/dependency_links.txt
pysmFISH.egg-info/entry_points.txt
pysmFISH.egg-info/requires.txt
pysmFISH.egg-info/top_level.txt
pysmFISH/stitching_package/GlobalOptimization.py
pysmFISH/stitching_package/MicroscopeData.py
pysmFISH/stitching_package/__init__.py
pysmFISH/stitching_package/hdf5preparation.py
pysmFISH/stitching_package/hybregistration.py
pysmFISH/stitching_package/inout.py
pysmFISH/stitching_package/pairwisehelper.py
pysmFISH/stitching_package/pairwisesingle.py
pysmFISH/stitching_package/stitching.py
pysmFISH/stitching_package/tilejoining.py