.gitignore
LICENSE
README.html
README.md
setup.py
docs/.gitignore
docs/Makefile
docs/conf.py
docs/development.rst
docs/index.rst
docs/installation.rst
docs/introduction.rst
docs/metadata.rst
docs/python_api.rst
docs/tutorial.rst
pyslim/__init__.py
pyslim/_version.py
pyslim/provenance.py
pyslim/slim_metadata.py
pyslim/slim_tree_sequence.py
pyslim.egg-info/PKG-INFO
pyslim.egg-info/SOURCES.txt
pyslim.egg-info/dependency_links.txt
pyslim.egg-info/not-zip-safe
pyslim.egg-info/requires.txt
pyslim.egg-info/top_level.txt
tests/__init__.py
tests/test_annotation.py
tests/test_metadata.py
tests/test_provenance.py
tests/test_tree_sequence.py
tests/examples/make_v3_tests.sh
tests/examples/recipe_WF.slim
tests/examples/recipe_WF.v3.0.trees
tests/examples/recipe_WF.v3.2.trees
tests/examples/recipe_long_nucleotides.slim
tests/examples/recipe_nonWF.slim
tests/examples/recipe_nonWF.v3.0.trees
tests/examples/recipe_nonWF.v3.2.trees
tests/examples/recipe_nucleotides.slim
tests/examples/recipe_record_everyone.slim
tests/examples/restart_WF.slim
tests/examples/restart_msprime.slim
tests/examples/restart_nonWF.slim
tests/examples/restart_nucleotides.slim