CONTRIBUTING.rst
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MANIFEST.in
README.rst
setup.cfg
setup.py
bin/pyretisanalyse
bin/pyretisrun
pyretis/__init__.py
pyretis/info.py
pyretis/version.py
pyretis.egg-info/PKG-INFO
pyretis.egg-info/SOURCES.txt
pyretis.egg-info/dependency_links.txt
pyretis.egg-info/requires.txt
pyretis.egg-info/top_level.txt
pyretis/analysis/__init__.py
pyretis/analysis/analysis.py
pyretis/analysis/energy_analysis.py
pyretis/analysis/flux_analysis.py
pyretis/analysis/histogram.py
pyretis/analysis/order_analysis.py
pyretis/analysis/path_analysis.py
pyretis/core/__init__.py
pyretis/core/box.py
pyretis/core/common.py
pyretis/core/montecarlo.py
pyretis/core/particlefunctions.py
pyretis/core/particles.py
pyretis/core/path.py
pyretis/core/pathensemble.py
pyretis/core/properties.py
pyretis/core/random_gen.py
pyretis/core/reservoirpath.py
pyretis/core/retis.py
pyretis/core/system.py
pyretis/core/tis.py
pyretis/core/units.py
pyretis/engines/__init__.py
pyretis/engines/cp2k.py
pyretis/engines/engine.py
pyretis/engines/external.py
pyretis/engines/gromacs.py
pyretis/engines/gromacs2.py
pyretis/engines/internal.py
pyretis/forcefield/__init__.py
pyretis/forcefield/factory.py
pyretis/forcefield/forcefield.py
pyretis/forcefield/potential.py
pyretis/forcefield/potentials/__init__.py
pyretis/forcefield/potentials/potentials.py
pyretis/forcefield/potentials/pairpotentials/__init__.py
pyretis/forcefield/potentials/pairpotentials/lennardjones.py
pyretis/forcefield/potentials/pairpotentials/pairpotential.py
pyretis/forcefield/potentials/pairpotentials/wca.py
pyretis/initiation/__init__.py
pyretis/initiation/initiate_kick.py
pyretis/initiation/initiate_load.py
pyretis/initiation/initiate_restart.py
pyretis/inout/__init__.py
pyretis/inout/common.py
pyretis/inout/restart.py
pyretis/inout/settings.py
pyretis/inout/analysisio/__init__.py
pyretis/inout/analysisio/analysisio.py
pyretis/inout/plotting/__init__.py
pyretis/inout/plotting/mpl_plotting.py
pyretis/inout/plotting/plotting.py
pyretis/inout/plotting/txt_plotting.py
pyretis/inout/plotting/styles/pyretis.mplstyle
pyretis/inout/report/__init__.py
pyretis/inout/report/markup.py
pyretis/inout/report/report.py
pyretis/inout/report/report_md.py
pyretis/inout/report/report_path.py
pyretis/inout/report/templates/report_mdflux.rst
pyretis/inout/report/templates/report_mdflux.tex
pyretis/inout/report/templates/report_mdflux.txt
pyretis/inout/report/templates/report_retis.rst
pyretis/inout/report/templates/report_retis.tex
pyretis/inout/report/templates/report_retis0.txt
pyretis/inout/report/templates/report_tis.rst
pyretis/inout/report/templates/report_tis.tex
pyretis/inout/report/templates/report_tis.txt
pyretis/inout/report/templates/report_tis_single.rst
pyretis/inout/report/templates/report_tis_single.tex
pyretis/inout/report/templates/report_tis_single.txt
pyretis/inout/setup/__init__.py
pyretis/inout/setup/common.py
pyretis/inout/setup/createforcefield.py
pyretis/inout/setup/createoutput.py
pyretis/inout/setup/createsimulation.py
pyretis/inout/setup/createsystem.py
pyretis/inout/writers/__init__.py
pyretis/inout/writers/cp2kio.py
pyretis/inout/writers/fileio.py
pyretis/inout/writers/gromacsio.py
pyretis/inout/writers/pathfile.py
pyretis/inout/writers/tablewriter.py
pyretis/inout/writers/txtinout.py
pyretis/inout/writers/writers.py
pyretis/inout/writers/xyzio.py
pyretis/orderparameter/__init__.py
pyretis/orderparameter/orderangle.py
pyretis/orderparameter/orderdihedral.py
pyretis/orderparameter/orderparameter.py
pyretis/simulation/__init__.py
pyretis/simulation/mc_simulation.py
pyretis/simulation/md_simulation.py
pyretis/simulation/path_simulation.py
pyretis/simulation/simulation.py
pyretis/simulation/simulation_task.py
pyretis/tools/__init__.py
pyretis/tools/lattice.py
pyretis/tools/recalculate_order.py