Please cite pypolca in your paper using:


Bouras G, Judd LM, Edwards RA, Vreugde S, Stinear TP, Wick RR. How low can you go? Short-read polishing of Oxford Nanopore bacterial genome assemblies. Microbial Genomics. 2024. doi: [https://doi.org/10.1099/mgen.0.001254](https://doi.org/10.1099/mgen.0.001254).

Zimin AV, Salzberg SL (2020) The genome polishing tool POLCA makes fast and accurate corrections in genome assemblies. PLoS Comput Biol 16(6): e1007981. [https://doi.org/10.1371/journal.pcbi.1007981](https://doi.org/10.1371/journal.pcbi.1007981).

