README.md
setup.py
pypka/__init__.py
pypka/__main__.py
pypka/addHtaut
pypka/cleaning.py
pypka/cli.py
pypka/concurrency.py
pypka/config.py
pypka/formats.py
pypka/log.py
pypka/mc.so
pypka/mc_setup.py
pypka/molecule.py
pypka/pypka.py
pypka/tautomer.py
pypka/titsite.py
pypka.egg-info/PKG-INFO
pypka.egg-info/SOURCES.txt
pypka.egg-info/dependency_links.txt
pypka.egg-info/entry_points.txt
pypka.egg-info/requires.txt
pypka.egg-info/top_level.txt
pypka/G54A7/DataBaseT.crg
pypka/G54A7/DataBaseT.crg~
pypka/G54A7/DataBaseT.siz
pypka/G54A7/DataBaseT.siz~
pypka/G54A7/sts/ACAall.st
pypka/G54A7/sts/ACAtau1.st
pypka/G54A7/sts/ACAtau2.st
pypka/G54A7/sts/ACAtau3.st
pypka/G54A7/sts/ACAtau4.st
pypka/G54A7/sts/ARGall.st
pypka/G54A7/sts/ARGtau1.st
pypka/G54A7/sts/ARGtau2.st
pypka/G54A7/sts/ARGtau3.st
pypka/G54A7/sts/ARGtau4.st
pypka/G54A7/sts/ASPall.st
pypka/G54A7/sts/ASPtau1.st
pypka/G54A7/sts/ASPtau2.st
pypka/G54A7/sts/ASPtau3.st
pypka/G54A7/sts/ASPtau4.st
pypka/G54A7/sts/BALtau1.st
pypka/G54A7/sts/BALtau2.st
pypka/G54A7/sts/BALtau3.st
pypka/G54A7/sts/CLall.st
pypka/G54A7/sts/CLtau1.st
pypka/G54A7/sts/CLtau2.st
pypka/G54A7/sts/CTALAall.st
pypka/G54A7/sts/CTALAtau1.st
pypka/G54A7/sts/CTALAtau2.st
pypka/G54A7/sts/CTALAtau3.st
pypka/G54A7/sts/CTALAtau4.st
pypka/G54A7/sts/CTRtau1.st
pypka/G54A7/sts/CTRtau2.st
pypka/G54A7/sts/CTRtau3.st
pypka/G54A7/sts/CTRtau4.st
pypka/G54A7/sts/CYSall.st
pypka/G54A7/sts/CYStau1.st
pypka/G54A7/sts/CYStau2.st
pypka/G54A7/sts/CYStau3.st
pypka/G54A7/sts/DAtau1.st
pypka/G54A7/sts/DAtau2.st
pypka/G54A7/sts/DXtau1.st
pypka/G54A7/sts/DXtau2.st
pypka/G54A7/sts/GLUall.st
pypka/G54A7/sts/GLUtau1.st
pypka/G54A7/sts/GLUtau2.st
pypka/G54A7/sts/GLUtau3.st
pypka/G54A7/sts/GLUtau4.st
pypka/G54A7/sts/HEMall.st
pypka/G54A7/sts/HIStau1.st
pypka/G54A7/sts/HIStau2.st
pypka/G54A7/sts/LYSall.st
pypka/G54A7/sts/LYStau1.st
pypka/G54A7/sts/LYStau2.st
pypka/G54A7/sts/LYStau3.st
pypka/G54A7/sts/MTYtau1.st
pypka/G54A7/sts/MTYtau2.st
pypka/G54A7/sts/NTALAall.st
pypka/G54A7/sts/NTALAtau1.st
pypka/G54A7/sts/NTALAtau2.st
pypka/G54A7/sts/NTALAtau3.st
pypka/G54A7/sts/NTPROall.st
pypka/G54A7/sts/NTPROtau1.st
pypka/G54A7/sts/NTPROtau2.st
pypka/G54A7/sts/NTRtau1.st
pypka/G54A7/sts/NTRtau2.st
pypka/G54A7/sts/NTRtau3.st
pypka/G54A7/sts/OLAall.st
pypka/G54A7/sts/OLAtau1.st
pypka/G54A7/sts/OLAtau2.st
pypka/G54A7/sts/OLAtau3.st
pypka/G54A7/sts/OLAtau4.st
pypka/G54A7/sts/PAtau1.st
pypka/G54A7/sts/PAtau2.st
pypka/G54A7/sts/PAtau3.st
pypka/G54A7/sts/PAtau4.st
pypka/G54A7/sts/PDtau1.st
pypka/G54A7/sts/PDtau2.st
pypka/G54A7/sts/PDtau3.st
pypka/G54A7/sts/PDtau4.st
pypka/G54A7/sts/PIXtau1.st
pypka/G54A7/sts/PIXtau2.st
pypka/G54A7/sts/PIXtau3.st
pypka/G54A7/sts/PIXtau4.st
pypka/G54A7/sts/PIXtau5.st
pypka/G54A7/sts/PIXtau6.st
pypka/G54A7/sts/PJXtau1.st
pypka/G54A7/sts/PJXtau2.st
pypka/G54A7/sts/SERtau1.st
pypka/G54A7/sts/SERtau2.st
pypka/G54A7/sts/SERtau3.st
pypka/G54A7/sts/THRtau1.st
pypka/G54A7/sts/THRtau1.st~
pypka/G54A7/sts/THRtau2.st
pypka/G54A7/sts/THRtau2.st~
pypka/G54A7/sts/THRtau3.st
pypka/G54A7/sts/THRtau3.st~
pypka/G54A7/sts/TYRall.st
pypka/G54A7/sts/TYRtau1.st
pypka/G54A7/sts/TYRtau2.st
pypka/delphi4py/__init__.py
pypka/delphi4py/delphi4py.py
pypka/delphi4py/readFiles/__init__.py
pypka/delphi4py/readFiles/memalloc.so
pypka/delphi4py/readFiles/readFiles.so
pypka/delphi4py/rundelphi/__init__.py
pypka/delphi4py/rundelphi/anagrd4.so
pypka/delphi4py/rundelphi/cent4.so
pypka/delphi4py/rundelphi/cfind4.so
pypka/delphi4py/rundelphi/chkcrg.so
pypka/delphi4py/rundelphi/clb.so
pypka/delphi4py/rundelphi/conplt.so
pypka/delphi4py/rundelphi/cputime.so
pypka/delphi4py/rundelphi/creapdb.so
pypka/delphi4py/rundelphi/crgarr.so
pypka/delphi4py/rundelphi/crgass4.so
pypka/delphi4py/rundelphi/cube.so
pypka/delphi4py/rundelphi/dbsfd.so
pypka/delphi4py/rundelphi/delphi.so
pypka/delphi4py/rundelphi/delphi2_last.so
pypka/delphi4py/rundelphi/distobj.so
pypka/delphi4py/rundelphi/distrTOpoint.so
pypka/delphi4py/rundelphi/elb.so
pypka/delphi4py/rundelphi/encalc4.so
pypka/delphi4py/rundelphi/epsmak.so
pypka/delphi4py/rundelphi/ex.so
pypka/delphi4py/rundelphi/expand4.so
pypka/delphi4py/rundelphi/extrm.so
pypka/delphi4py/rundelphi/extrmobjects.so
pypka/delphi4py/rundelphi/form2.so
pypka/delphi4py/rundelphi/fxhl.so
pypka/delphi4py/rundelphi/getatm2.so
pypka/delphi4py/rundelphi/grdatm.so
pypka/delphi4py/rundelphi/ichash4.so
pypka/delphi4py/rundelphi/indver.so
pypka/delphi4py/rundelphi/itit4j.so
pypka/delphi4py/rundelphi/memalloc.so
pypka/delphi4py/rundelphi/mkdbsf.so
pypka/delphi4py/rundelphi/mkvtl.so
pypka/delphi4py/rundelphi/msrf.so
pypka/delphi4py/rundelphi/namlen3.so
pypka/delphi4py/rundelphi/nitit.so
pypka/delphi4py/rundelphi/nlener.so
pypka/delphi4py/rundelphi/nlsolvermodule.so
pypka/delphi4py/rundelphi/objvertices.so
pypka/delphi4py/rundelphi/off4.so
pypka/delphi4py/rundelphi/omalt.so
pypka/delphi4py/rundelphi/phicon.so
pypka/delphi4py/rundelphi/phintp4.so
pypka/delphi4py/rundelphi/qinttot.so
pypka/delphi4py/rundelphi/radass4.so
pypka/delphi4py/rundelphi/rdhcrg.so
pypka/delphi4py/rundelphi/rdhrad.so
pypka/delphi4py/rundelphi/rdiv.so
pypka/delphi4py/rundelphi/react2.so
pypka/delphi4py/rundelphi/readFiles.so
pypka/delphi4py/rundelphi/relfac4b.so
pypka/delphi4py/rundelphi/rent4.so
pypka/delphi4py/rundelphi/rfind4.so
pypka/delphi4py/rundelphi/rforce.so
pypka/delphi4py/rundelphi/rundelphi.so
pypka/delphi4py/rundelphi/sas.so
pypka/delphi4py/rundelphi/scale.so
pypka/delphi4py/rundelphi/scaler4.so
pypka/delphi4py/rundelphi/setbc4.so
pypka/delphi4py/rundelphi/setcrg.so
pypka/delphi4py/rundelphi/setfcrg.so
pypka/delphi4py/rundelphi/setout.so
pypka/delphi4py/rundelphi/setrc4d.so
pypka/delphi4py/rundelphi/solvermodule.so
pypka/delphi4py/rundelphi/surfacemodule.so
pypka/delphi4py/rundelphi/timef.so
pypka/delphi4py/rundelphi/ts.so
pypka/delphi4py/rundelphi/up.so
pypka/delphi4py/rundelphi/vwtms2.so
pypka/delphi4py/rundelphi/watpte.so
pypka/delphi4py/rundelphi/watput.so
pypka/delphi4py/rundelphi/wrapper.py
pypka/delphi4py/rundelphi/wrt4.so
pypka/delphi4py/rundelphi/wrtatd.so
pypka/delphi4py/rundelphi/wrteps4b.so
pypka/delphi4py/rundelphi/wrtgcrg.so
pypka/delphi4py/rundelphi/wrtphi.so
pypka/delphi4py/rundelphi/wrtphi_last.so
pypka/delphi4py/rundelphi/wrtprm.so
pypka/delphi4py/rundelphi/wrtsit4.so
pypka/delphi4py/rundelphi/wrtsurf.so
pypka/example/__init__.py
pypka/pdb2pqr/AUTHORS
pypka/pdb2pqr/AppService_client.pyc
pypka/pdb2pqr/AppService_services.pyc
pypka/pdb2pqr/AppService_services_types.pyc
pypka/pdb2pqr/AppService_types.pyc
pypka/pdb2pqr/COPYING
pypka/pdb2pqr/ChangeLog.md
pypka/pdb2pqr/NEWS
pypka/pdb2pqr/README.md
pypka/pdb2pqr/apbs_cgi.cgi
pypka/pdb2pqr/index.html
pypka/pdb2pqr/main.pyc
pypka/pdb2pqr/main_cgi.pyc
pypka/pdb2pqr/pdb2pqr.cgi
pypka/pdb2pqr/pdb2pqr.css
pypka/pdb2pqr/pdb2pqr.py
pypka/pdb2pqr/pdb2pqr.pyc
pypka/pdb2pqr/pka.pyc
pypka/pdb2pqr/querystatus.cgi
pypka/pdb2pqr/visualize.cgi
pypka/pdb2pqr/ZSI/LBNLCopyright
pypka/pdb2pqr/ZSI/ServiceContainer.pyc
pypka/pdb2pqr/ZSI/ServiceProxy.pyc
pypka/pdb2pqr/ZSI/TC.pyc
pypka/pdb2pqr/ZSI/TCapache.pyc
pypka/pdb2pqr/ZSI/TCcompound.pyc
pypka/pdb2pqr/ZSI/TCnumbers.pyc
pypka/pdb2pqr/ZSI/TCtimes.pyc
pypka/pdb2pqr/ZSI/__init__.pyc
pypka/pdb2pqr/ZSI/address.pyc
pypka/pdb2pqr/ZSI/auth.pyc
pypka/pdb2pqr/ZSI/client.pyc
pypka/pdb2pqr/ZSI/digest_auth.pyc
pypka/pdb2pqr/ZSI/dispatch.pyc
pypka/pdb2pqr/ZSI/fault.pyc
pypka/pdb2pqr/ZSI/parse.pyc
pypka/pdb2pqr/ZSI/resolvers.pyc
pypka/pdb2pqr/ZSI/schema.pyc
pypka/pdb2pqr/ZSI/typeinterpreter.pyc
pypka/pdb2pqr/ZSI/version.pyc
pypka/pdb2pqr/ZSI/writer.pyc
pypka/pdb2pqr/dat/AA.xml
pypka/pdb2pqr/dat/AMBER.DAT
pypka/pdb2pqr/dat/AMBER.names
pypka/pdb2pqr/dat/AMBER.names~
pypka/pdb2pqr/dat/CHARMM.DAT
pypka/pdb2pqr/dat/CHARMM.names
pypka/pdb2pqr/dat/GROMOS.DAT
pypka/pdb2pqr/dat/GROMOS.DAT~
pypka/pdb2pqr/dat/GROMOS.names
pypka/pdb2pqr/dat/GROMOS.names~
pypka/pdb2pqr/dat/GROMOS1.DAT
pypka/pdb2pqr/dat/GROMOS1.names
pypka/pdb2pqr/dat/GROMOS2.DaT
pypka/pdb2pqr/dat/GROMOS_.names
pypka/pdb2pqr/dat/GROMOS_.names~
pypka/pdb2pqr/dat/GROMOS_new.DAT
pypka/pdb2pqr/dat/GROMOS_new.names
pypka/pdb2pqr/dat/HYDROGENS.xml
pypka/pdb2pqr/dat/NA.xml
pypka/pdb2pqr/dat/PARSE.DAT
pypka/pdb2pqr/dat/PARSE.names
pypka/pdb2pqr/dat/PATCHES.xml
pypka/pdb2pqr/dat/PEOEPB.DAT
pypka/pdb2pqr/dat/PEOEPB.names
pypka/pdb2pqr/dat/SWANSON.DAT
pypka/pdb2pqr/dat/SWANSON.names
pypka/pdb2pqr/dat/TOPOLOGY.xml
pypka/pdb2pqr/dat/TYL06.DAT
pypka/pdb2pqr/dat/TYL06.names
pypka/pdb2pqr/dat/database.crg
pypka/pdb2pqr/dat/database.crgsiz
pypka/pdb2pqr/dat/database.crgsiz~
pypka/pdb2pqr/dat/database.crg~
pypka/pdb2pqr/dat/database.siz
pypka/pdb2pqr/dat/ff2dat.py_script
pypka/pdb2pqr/dat/ff2dat.py~
pypka/pdb2pqr/dat/ffG54a7pHt.rtp
pypka/pdb2pqr/extensions/__init__.pyc
pypka/pdb2pqr/extensions/chi.pyc
pypka/pdb2pqr/extensions/contact.pyc
pypka/pdb2pqr/extensions/hbond.pyc
pypka/pdb2pqr/extensions/newresinter.pyc
pypka/pdb2pqr/extensions/rama.pyc
pypka/pdb2pqr/extensions/resinter.pyc
pypka/pdb2pqr/extensions/salt.pyc
pypka/pdb2pqr/extensions/summary.pyc
pypka/pdb2pqr/src/__init__.pyc
pypka/pdb2pqr/src/aa.pyc
pypka/pdb2pqr/src/aconf.pyc
pypka/pdb2pqr/src/definitions.pyc
pypka/pdb2pqr/src/errors.pyc
pypka/pdb2pqr/src/forcefield.pyc
pypka/pdb2pqr/src/hydrogens.pyc
pypka/pdb2pqr/src/inputgen.pyc
pypka/pdb2pqr/src/na.pyc
pypka/pdb2pqr/src/pdb.pyc
pypka/pdb2pqr/src/protein.pyc
pypka/pdb2pqr/src/psize.pyc
pypka/pdb2pqr/src/quatfit.pyc
pypka/pdb2pqr/src/routines.pyc
pypka/pdb2pqr/src/server.pyc
pypka/pdb2pqr/src/structures.pyc
pypka/pdb2pqr/src/topology.pyc
pypka/pdb2pqr/src/utilities.pyc
pypka/tests/__init__.py
pypka/tests/test.py