README.md
setup.py
pyoverchain/__init__.py
pyoverchain.egg-info/PKG-INFO
pyoverchain.egg-info/SOURCES.txt
pyoverchain.egg-info/dependency_links.txt
pyoverchain.egg-info/entry_points.txt
pyoverchain.egg-info/requires.txt
pyoverchain.egg-info/top_level.txt
pyoverchain/cmd/__init__.py
pyoverchain/cmd/run.py
pyoverchain/core/__init__.py
pyoverchain/core/axtchain.py
pyoverchain/core/blat.py
pyoverchain/core/chainMergeSort.py
pyoverchain/core/chainNet.py
pyoverchain/core/chr_separation.py
pyoverchain/core/faSplit.py
pyoverchain/core/liftUp.py
pyoverchain/core/netChainSubset.py
pyoverchain/core/pipeline_multiple.py
pyoverchain/core/pipeline_single.py
pyoverchain/core/version.py