CHANGELOG.md
LICENSE
MANIFEST.in
README.rst
pyproject.toml
setup.cfg
tox.ini
docs/Makefile
docs/REST_API_definition.openapi.yaml
docs/make.bat
docs/requirements.txt
docs/manuscripts/linreg_joss/fig-1.png
docs/manuscripts/linreg_joss/fig-2.png
docs/manuscripts/linreg_joss/fig-3.png
docs/manuscripts/linreg_joss/fig-4.png
docs/manuscripts/linreg_joss/paper.bib
docs/manuscripts/linreg_joss/paper.md
docs/source/conf.py
docs/source/index.rst
src/nidm/__init__.py
src/nidm/util.py
src/nidm/core/BIDS_Constants.py
src/nidm/core/Constants.py
src/nidm/core/__init__.py
src/nidm/core/dot.py
src/nidm/core/provone.py
src/nidm/core/cde_dir/ants_cde.ttl
src/nidm/core/cde_dir/fs_cde.ttl
src/nidm/core/cde_dir/fsl_cde.ttl
src/nidm/core/serializers/__init__.py
src/nidm/core/serializers/provonerdf.py
src/nidm/experiment/Acquisition.py
src/nidm/experiment/AcquisitionObject.py
src/nidm/experiment/AssessmentAcquisition.py
src/nidm/experiment/AssessmentObject.py
src/nidm/experiment/CDE.py
src/nidm/experiment/Core.py
src/nidm/experiment/DataElement.py
src/nidm/experiment/DemographicsObject.py
src/nidm/experiment/Derivative.py
src/nidm/experiment/DerivativeObject.py
src/nidm/experiment/MRAcquisition.py
src/nidm/experiment/MRObject.py
src/nidm/experiment/Navigate.py
src/nidm/experiment/PETAcquisition.py
src/nidm/experiment/PETObject.py
src/nidm/experiment/Project.py
src/nidm/experiment/Query.py
src/nidm/experiment/Session.py
src/nidm/experiment/Utils.py
src/nidm/experiment/__init__.py
src/nidm/experiment/tools/__init__.py
src/nidm/experiment/tools/agent.ttl
src/nidm/experiment/tools/bidsmri2nidm.py
src/nidm/experiment/tools/click_base.py
src/nidm/experiment/tools/click_main.py
src/nidm/experiment/tools/csv2nidm.py
src/nidm/experiment/tools/nidm2bids.py
src/nidm/experiment/tools/nidm_affinity_propagation.py
src/nidm/experiment/tools/nidm_agglomerative_clustering.py
src/nidm/experiment/tools/nidm_concat.py
src/nidm/experiment/tools/nidm_convert.py
src/nidm/experiment/tools/nidm_gmm.py
src/nidm/experiment/tools/nidm_kmeans.py
src/nidm/experiment/tools/nidm_linreg.py
src/nidm/experiment/tools/nidm_merge.py
src/nidm/experiment/tools/nidm_query.py
src/nidm/experiment/tools/nidm_utils.py
src/nidm/experiment/tools/nidm_version.py
src/nidm/experiment/tools/nidm_visualize.py
src/nidm/experiment/tools/repronim_simple2_brainvolumes.py
src/nidm/experiment/tools/repronim_simple2_query.txt
src/nidm/experiment/tools/rest.py
src/nidm/experiment/tools/rest_statistics.py
src/nidm/experiment/tools/update_old_simple2_nidm.py
src/nidm/experiment/tools/utils.py
src/nidm/terms/__init__.py
src/nidm/terms/imports/crypto_import.ttl
src/nidm/terms/imports/dc_import.ttl
src/nidm/terms/imports/iao_import.ttl
src/nidm/terms/imports/nfo_import.ttl
src/nidm/terms/imports/nlx_import.ttl
src/nidm/terms/imports/obi_import.ttl
src/nidm/terms/imports/ontoneurolog_instruments_import.ttl
src/nidm/terms/imports/pato_import.ttl
src/nidm/terms/imports/prov-o
src/nidm/terms/imports/prv_import.ttl
src/nidm/terms/imports/qibo_import.ttl
src/nidm/terms/imports/sio_import.ttl
src/nidm/terms/imports/stato_import.ttl
src/nidm/workflows/ProcessExecution.py
src/nidm/workflows/ProcessSpecification.py
src/nidm/workflows/__init__.py
src/pynidm.egg-info/PKG-INFO
src/pynidm.egg-info/SOURCES.txt
src/pynidm.egg-info/dependency_links.txt
src/pynidm.egg-info/entry_points.txt
src/pynidm.egg-info/requires.txt
src/pynidm.egg-info/top_level.txt
tests/core/__init__.py
tests/core/test_provone.py
tests/experiment/__init__.py
tests/experiment/conftest.py
tests/experiment/create_testfile.py
tests/experiment/read_nidm.py
tests/experiment/termsearch.py
tests/experiment/test_experiment.py
tests/experiment/test_experiment_basic.py
tests/experiment/test_load_nidmowl.py
tests/experiment/test_map_vars_to_terms.py
tests/experiment/test_navigate.py
tests/experiment/test_nidm.png
tests/experiment/test_nidm.ttl
tests/experiment/test_query.py
tests/experiment/tools/__init__.py
tests/experiment/tools/test_nidm_lingreg.py
tests/experiment/tools/test_nidm_query.py
tests/experiment/tools/test_rest.py
tests/experiment/tools/test_rest_dataelements.py
tests/experiment/tools/test_rest_statistics.py
tests/experiment/tools/test_rest_subjects.py
tests/workflows/__init__.py
tests/workflows/test_workflows.py