PYNML-PLOTSPIKES(1)

NAME
pynml-plotspikes - manual page for pynml-plotspikes v1.3.21

DESCRIPTION
usage: pynml-plotspikes [-h] [-format <format>] [-offset] [-rates]

[-showPlotsAlready]
    [-saveSpikePlotTo <spiketime plot filename>] [-rateWindow <rate window>] [-rateBins <rate bins>] <spiketime file> [<spiketime file> ...]

A script for plotting files containing spike time data

  positional arguments:

<spiketime file>
    List of text file containing spike times

  options:

-h, --help
    show this help message and exit

-format <format>
    How the spiketimes are represented on each line of file:

- id_t: id of cell, space(s) / tab(s), time of spike (default);
    - id_t_nest_dat: id of cell, space(s) / tab(s), time of spike, allowing NEST dat file comments/metadata - t_id: time of spike, space(s) / tab(s), id of cell - sonata: SONATA format HDF5 file containing spike times

-offset
    Toggle whether plots are overlaid or offset

-rates
    Show a plot of rates

-showPlotsAlready
    Show plots once generated

-saveSpikePlotTo <spiketime plot filename>
    Name of file in which to save spiketime plot

-rateWindow <rate window>
    Window for rate calculation in ms

-rateBins <rate bins>
    Number of bins for rate histogram

SEE-ALSO
pynml(1), pynml-archive(1), pynml-channelanalysis(1), pynml-channelml2nml(1), pynml-modchananalysis(1), pynml-plotchan(1), pynml-plotmorph(1), pynml-plotspikes(1), pynml-plottimeseries(1), pynml-povray(1), pynml-sonata(1), pynml-summary(1), pynml-swc2nml(1), pynml-tune(1), pynml-xpp(1),

Please see https://docs.neuroml.org for complete documentation on the NeuroML standard and the software ecosystem.

ENVIRONMENT

pyNeuroML v1.3.21 (libNeuroML v0.6.7, jNeuroML v0.14.0)