PYNML-MODCHANANALYSIS(1)

NAME
pynml-modchananalysis - manual page for pynml-modchananalysis v1.3.21

DESCRIPTION
usage: pynml-modchananalysis [-h] [-v] [-nogui] [-savePlots] [-minV <min v>]

[-maxV <max v>] [-stepV <step v>]
    [-dt <time step>] [-duration <duration>] [-temperature <temperature>] [-caConc <Ca2+ concentration>] [-modFile <name of mod file>] <channel name>

A script which can be run in (Python enabled) NEURON to analyse the rate variables contained in a mod file

  positional arguments:

<channel name>
    Name of the channel as used by NEURON (i.e. in SUFFIX statement)

  options:

-h, --help
    show this help message and exit

-v  Verbose output

-nogui
    Supress plotting of variables and only save to file

-savePlots
    Export image (.png) of plotted figures to device

-minV <min v>
    Minimum voltage to test (integer, mV)

-maxV <max v>
    Maximum voltage to test (integer, mV)

-stepV <step v>
    Voltage step to use (integer, mV)

-dt <time step>
    Timestep for simulations, dt, in ms

-duration <duration>
    Maximum duration of simulations, in ms

-temperature <temperature>
    Temperature (float or list, e.g. [22,34], celsius)

-caConc <Ca2+ concentration>
    Internal concentration of Ca2+ (float, concentration in mM)

-modFile <name of mod file>
    Name of the mod file containing the channel

SEE-ALSO
pynml(1), pynml-archive(1), pynml-channelanalysis(1), pynml-channelml2nml(1), pynml-modchananalysis(1), pynml-plotchan(1), pynml-plotmorph(1), pynml-plotspikes(1), pynml-plottimeseries(1), pynml-povray(1), pynml-sonata(1), pynml-summary(1), pynml-swc2nml(1), pynml-tune(1), pynml-xpp(1),

Please see https://docs.neuroml.org for complete documentation on the NeuroML standard and the software ecosystem.

ENVIRONMENT

pyNeuroML v1.3.21 (libNeuroML v0.6.7, jNeuroML v0.14.0)