Linux Setup

Overview

• Install Python 3.12.3

• Install pipx with pip install pipx

• Install poetry with pipx install poetry

• Clone the PyMedPhys git repo

• Run poetry install -E all within the root of the repo

• Run poetry run pre-commit install

• Install pandoc via your package manager

  • eg. sudo apt-get install pandoc

You’re good to go.

Opinionated Recommendations

• Install Python with pyenv

  • Install prerequisites

  • Install pyenv

  • Configure pyenv

• Install VSCode as your code editor

• Install Jupyter Lab to work with Notebooks