LICENSE
README.md
pyproject.toml
setup.py
pymCADRE.egg-info/PKG-INFO
pymCADRE.egg-info/SOURCES.txt
pymCADRE.egg-info/dependency_links.txt
pymCADRE.egg-info/requires.txt
pymCADRE.egg-info/top_level.txt
pymCADRE_code/code/__init__.py
pymCADRE_code/code/pymcadre.py
pymCADRE_code/code/check/__init__.py
pymCADRE_code/code/check/check_model_function.py
pymCADRE_code/code/check/check_rxn_flux.py
pymCADRE_code/code/check/find_ex_reactions.py
pymCADRE_code/code/check/find_organic_ex_rxns.py
pymCADRE_code/code/check/find_required_rxns.py
pymCADRE_code/code/check/set_metabolite_bounds.py
pymCADRE_code/code/prune/__init__.py
pymCADRE_code/code/prune/check_core_deadends.py
pymCADRE_code/code/prune/check_model_consistency.py
pymCADRE_code/code/prune/check_salvage_path.py
pymCADRE_code/code/prune/find_inactive_rxns.py
pymCADRE_code/code/prune/prune_model.py
pymCADRE_code/code/rank/__init__.py
pymCADRE_code/code/rank/calc_conn_evidence.py
pymCADRE_code/code/rank/calc_expr_evidence.py
pymCADRE_code/code/rank/initialize_generic_model.py
pymCADRE_code/code/rank/map_gene_scores_to_rxns.py
pymCADRE_code/code/rank/map_high_conf_to_rxns.py
pymCADRE_code/code/rank/parse_gprs.py
pymCADRE_code/code/rank/rank_reactions.py
pymCADRE_code/pre_processing/consistent_conf_scores.py
pymCADRE_code/pre_processing/data_preprocessing.py
pymCADRE_code/pre_processing/entrez_ids.py
pymCADRE_code/pre_processing/format_model_matlab.py
pymCADRE_code/pre_processing/get_conf_scores.py
pymCADRE_code/pre_processing/ubiquity_scores.py