Metadata-Version: 2.1
Name: pylattice
Version: 0.1.2
Summary: A python library for lattice light-sheet image analysis
Home-page: https://github.com/JohSchoeneberg/pyLattice
Author: Joh Schoeneberg
Author-email: joh@schoeneberglab.org
License: UNKNOWN
Description: # pyLattice
        A python library for advanced lattice light-sheet image analysis
        
        Welcome!
        
        Please read the [manual](./docs/PyLattice_Manual.pdf) to get started.
        
        ![Logo](./docs/pyLattice_logo.png)
        
        
        ## Installation
        
        clone or download the repository
        ```bash
        pip install pylattice
        pip install -r requirements.txt
        cd source/jupyter
        jupyter notebook
        ```
        in browser open `source/jupyter/latticeFrame_showFrame.ipynb`
        
        ## Test data
        
        A small test data set can be found here:
        https://www.dropbox.com/sh/s7q45h7wqoco5hl/AAB2Tt5lTGSkF2VhMTMM8NEWa?dl=0
        
        ## FAQ
        
        [Lattice Light-Sheet Microscopy](https://en.wikipedia.org/wiki/Lattice_light-sheet_microscopy)
        
        
        
        ## References
        
        - scikit http://scikit-image.org
        - ChimeraX https://www.cgl.ucsf.edu/chimerax/
        - llsm tools https://github.com/francois-a/llsmtools
        - utrack https://www.utsouthwestern.edu/labs/danuser/software/#utrack_ancs
        - Joh Schöneberg http://www.schoeneberglab.org
        - The Betzig Lab https://www.janelia.org/lab/betzig-lab
        - The Drubin/Barnes Lab https://drubinbarneslab.berkeley.edu
        
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Topic :: Scientific/Engineering
Description-Content-Type: text/markdown
