LICENSE
MANIFEST.in
README.rst
requirements.txt
setup.py
./bin/pyhrf_crop_data
./bin/pyhrf_extract_cc_vol
./bin/pyhrf_glm_buildcfg
./bin/pyhrf_glm_estim
./bin/pyhrf_gls
./bin/pyhrf_info
./bin/pyhrf_jde_buildcfg
./bin/pyhrf_jde_estim
./bin/pyhrf_jde_vem_analysis
./bin/pyhrf_list_datafiles
./bin/pyhrf_maketests
./bin/pyhrf_mask_from_bold
./bin/pyhrf_nii_mean
./bin/pyhrf_nii_split
./bin/pyhrf_nii_std
./bin/pyhrf_parcellate_glm
./bin/pyhrf_parcellate_spatial
./bin/pyhrf_parcellation_extract
./bin/pyhrf_parcellation_merge_small
./bin/pyhrf_plot_mip
./bin/pyhrf_plot_slice
./bin/pyhrf_project_data
./bin/pyhrf_rfir_buildcfg
./bin/pyhrf_rfir_estim
./bin/pyhrf_script_shortcut
./bin/pyhrf_spm_cpt_con_var
./bin/pyhrf_spm_fixnames
./bin/pyhrf_spm_gen_design_signal
./bin/pyhrf_src_path
./bin/pyhrf_validate
python/pyhrf/__init__.py
python/pyhrf/_verbose.py
python/pyhrf/configuration.py
python/pyhrf/core.py
python/pyhrf/glm.py
python/pyhrf/graph.py
python/pyhrf/grid.py
python/pyhrf/ndarray.py
python/pyhrf/paradigm.py
python/pyhrf/parallel.py
python/pyhrf/parcellation.py
python/pyhrf/plot.py
python/pyhrf/rfir.py
python/pyhrf/surface.py
python/pyhrf/usemode.py
python/pyhrf/version.py
python/pyhrf/xmlio.py
python/pyhrf.egg-info/PKG-INFO
python/pyhrf.egg-info/SOURCES.txt
python/pyhrf.egg-info/dependency_links.txt
python/pyhrf.egg-info/not-zip-safe
python/pyhrf.egg-info/requires.txt
python/pyhrf.egg-info/top_level.txt
python/pyhrf/boldsynth/__init__.py
python/pyhrf/boldsynth/field.py
python/pyhrf/boldsynth/hrf.py
python/pyhrf/boldsynth/scenarios.py
python/pyhrf/boldsynth/spatialconfig.py
python/pyhrf/boldsynth/pottsfield/__init__.py
python/pyhrf/boldsynth/pottsfield/swendsenwang.py
python/pyhrf/datafiles/SPM_v12.mat.gz
python/pyhrf/datafiles/SPM_v5.mat.gz
python/pyhrf/datafiles/SPM_v8.mat.gz
python/pyhrf/datafiles/cortex_occipital_hrf_territories_3mm.nii
python/pyhrf/datafiles/cortex_occipital_hrf_territories_convex_hull.tgz
python/pyhrf/datafiles/cortex_occipital_right_GWmask_3mm.nii.gz
python/pyhrf/datafiles/cortex_occipital_white_surf.gii.gz
python/pyhrf/datafiles/dummySmallBOLD.nii.gz
python/pyhrf/datafiles/dummySmallMask.nii.gz
python/pyhrf/datafiles/paradigm_V4.csv
python/pyhrf/datafiles/paradigm_loc.csv
python/pyhrf/datafiles/paradigm_loc_a.csv
python/pyhrf/datafiles/paradigm_loc_av.csv
python/pyhrf/datafiles/paradigm_loc_av_comma.csv
python/pyhrf/datafiles/paradigm_loc_av_d.csv
python/pyhrf/datafiles/paradigm_loc_c_only.csv
python/pyhrf/datafiles/paradigm_loc_cp_only.csv
python/pyhrf/datafiles/paradigm_loc_cpcd.csv
python/pyhrf/datafiles/real_data_surf_tiny_bold.gii
python/pyhrf/datafiles/real_data_surf_tiny_mesh.gii
python/pyhrf/datafiles/real_data_surf_tiny_parcellation.gii
python/pyhrf/datafiles/real_data_vol_4_regions_BOLD.nii.gz
python/pyhrf/datafiles/real_data_vol_4_regions_anatomy.nii.gz
python/pyhrf/datafiles/real_data_vol_4_regions_mask.nii.gz
python/pyhrf/datafiles/simu.pck
python/pyhrf/datafiles/simu_hrf_3_territories.png
python/pyhrf/datafiles/simu_hrf_3_territories_8x8.png
python/pyhrf/datafiles/simu_hrf_4_territories.png
python/pyhrf/datafiles/simu_labels_activated.png
python/pyhrf/datafiles/simu_labels_ghost.png
python/pyhrf/datafiles/simu_labels_house_sun.png
python/pyhrf/datafiles/simu_labels_icassp13.png
python/pyhrf/datafiles/simu_labels_invader.png
python/pyhrf/datafiles/simu_labels_pacman.png
python/pyhrf/datafiles/simu_labels_small_spots_1.png
python/pyhrf/datafiles/simu_labels_small_spots_2.png
python/pyhrf/datafiles/simu_labels_stretched_1.png
python/pyhrf/datafiles/simu_labels_template.png
python/pyhrf/datafiles/simu_labels_tiny_1.png
python/pyhrf/datafiles/simu_labels_tiny_2.png
python/pyhrf/datafiles/simu_labels_tiny_3.png
python/pyhrf/datafiles/stanford_willard_parcellation_3x3x3mm.nii.gz
python/pyhrf/datafiles/subj0_anatomy.nii.gz
python/pyhrf/datafiles/subj0_bold_session0.nii.gz
python/pyhrf/datafiles/subj0_parcellation.nii.gz
python/pyhrf/datafiles/subj0_single_roi.nii.gz
python/pyhrf/jde/__init__.py
python/pyhrf/jde/asl.py
python/pyhrf/jde/asl_2steps.py
python/pyhrf/jde/asl_physio.py
python/pyhrf/jde/asl_physio_1step.py
python/pyhrf/jde/asl_physio_1step_params.py
python/pyhrf/jde/asl_physio_det_fwdm.py
python/pyhrf/jde/asl_physio_hierarchical.py
python/pyhrf/jde/asl_physio_joint.py
python/pyhrf/jde/beta.py
python/pyhrf/jde/drift.py
python/pyhrf/jde/hrf.py
python/pyhrf/jde/jde_multi_sess.py
python/pyhrf/jde/jde_multi_sujets.py
python/pyhrf/jde/jde_multi_sujets_alpha.py
python/pyhrf/jde/models.py
python/pyhrf/jde/noise.py
python/pyhrf/jde/samplerbase.py
python/pyhrf/jde/wsampler.py
python/pyhrf/jde/nrl/__init__.py
python/pyhrf/jde/nrl/ar.py
python/pyhrf/jde/nrl/base.py
python/pyhrf/jde/nrl/bigaussian.py
python/pyhrf/jde/nrl/bigaussian_drift.py
python/pyhrf/jde/nrl/gammagaussian.py
python/pyhrf/jde/nrl/habituation.py
python/pyhrf/jde/nrl/trigaussian.py
python/pyhrf/sandbox/__init__.py
python/pyhrf/sandbox/data_parser.py
python/pyhrf/sandbox/func_BMA_consensus_clustering.py
python/pyhrf/sandbox/make_parcellation.py
python/pyhrf/sandbox/parcellation.py
python/pyhrf/sandbox/physio.py
python/pyhrf/sandbox/physio_params.py
python/pyhrf/sandbox/stats.py
python/pyhrf/stats/__init__.py
python/pyhrf/stats/misc.py
python/pyhrf/stats/random.py
python/pyhrf/test/__init__.py
python/pyhrf/test/analysertest.py
python/pyhrf/test/boldsynthTest.py
python/pyhrf/test/commandTest.py
python/pyhrf/test/core_test.py
python/pyhrf/test/graphtest.py
python/pyhrf/test/iotest.py
python/pyhrf/test/jdetest.py
python/pyhrf/test/rfir_test.py
python/pyhrf/test/seppotest.py
python/pyhrf/test/statsTest.py
python/pyhrf/test/test.py
python/pyhrf/test/test_glm.py
python/pyhrf/test/test_jde_multi_subj.py
python/pyhrf/test/test_jde_vem_asl.py
python/pyhrf/test/test_jde_vem_bold.py
python/pyhrf/test/test_jde_vem_tools.py
python/pyhrf/test/test_jde_vem_tools_UtilsC.py
python/pyhrf/test/test_jde_vem_tools_asl.py
python/pyhrf/test/test_ndarray.py
python/pyhrf/test/test_paradigm.py
python/pyhrf/test/test_parallel.py
python/pyhrf/test/test_parcellation.py
python/pyhrf/test/test_plot.py
python/pyhrf/test/test_rfir.py
python/pyhrf/test/test_sampler.py
python/pyhrf/test/test_sandbox_physio.py
python/pyhrf/test/test_treatment.py
python/pyhrf/test/test_xml.py
python/pyhrf/test/toolsTest.py
python/pyhrf/tools/__init__.py
python/pyhrf/tools/aexpression.py
python/pyhrf/tools/backports.py
python/pyhrf/tools/cpus.py
python/pyhrf/tools/message.py
python/pyhrf/tools/misc.py
python/pyhrf/tools/_io/__init__.py
python/pyhrf/tools/_io/_io.py
python/pyhrf/tools/_io/_zip.py
python/pyhrf/tools/_io/spmio.py
python/pyhrf/tools/_io/tio.py
python/pyhrf/ui/__init__.py
python/pyhrf/ui/analyser_ui.py
python/pyhrf/ui/glm_analyser.py
python/pyhrf/ui/glm_ui.py
python/pyhrf/ui/jde.py
python/pyhrf/ui/rfir_ui.py
python/pyhrf/ui/treatment.py
python/pyhrf/ui/vb_jde_analyser.py
python/pyhrf/ui/vb_jde_analyser_asl_fast.py
python/pyhrf/ui/vb_jde_analyser_bold_fast.py
python/pyhrf/validation/__init__.py
python/pyhrf/validation/config.py
python/pyhrf/validation/valid_beta_estim.py
python/pyhrf/validation/valid_jde_asl.py
python/pyhrf/validation/valid_jde_asl_physio.py
python/pyhrf/validation/valid_jde_asl_physio_alpha.py
python/pyhrf/validation/valid_jde_bold_mono_subj_multi_sess.py
python/pyhrf/validation/valid_jde_bold_mono_subj_sess.py
python/pyhrf/validation/valid_jde_vem_asl.py
python/pyhrf/validation/valid_rfir.py
python/pyhrf/validation/valid_rndm_field.py
python/pyhrf/validation/valid_sandbox_parcellation.py
python/pyhrf/vbjde/__init__.py
python/pyhrf/vbjde/vem_asl_models_fast.py
python/pyhrf/vbjde/vem_asl_models_fast_ms.py
python/pyhrf/vbjde/vem_bold.py
python/pyhrf/vbjde/vem_bold_constrained.py
python/pyhrf/vbjde/vem_bold_models_fast.py
python/pyhrf/vbjde/vem_bold_models_fast_ms.py
python/pyhrf/vbjde/vem_tools.py
python/pyhrf/xmliobak/__init__.py
python/pyhrf/xmliobak/xmlbase.py
python/pyhrf/xmliobak/xmlmatlab.py
python/pyhrf/xmliobak/xmlnumpy.py
src/pyhrf/cparcellation.c
src/pyhrf/boldsynth/pottsfield/pottsField.c
src/pyhrf/jde/intensivecalc.c
src/pyhrf/vbjde/utilsmodule.c