#                                                                        --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name           accession   query name                accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#   -------------------  ----------      -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Proteusin_Epimerase_RRE RREFam010.1 938293.PRJEB85.HG003688_1 -            4.3e-05   13.0   0.0     8e-05   12.1   0.0   1.4   1   0   0   1   1   1   1 RRE-containing epimerase in a proteusin cluster
Ranthipeptide_rSAM_RRE RREFam024.1 938293.PRJEB85.HG003684_52 -            9.3e-06   15.3   0.6   7.7e-05   12.4   0.1   2.3   1   1   1   2   2   2   1 RRE-containing rSAM protein in a ranthipeptide/SCIFF cluster
Thiaglutamate_B_RRE  RREFam028.1 938293.PRJEB85.HG003691_74 -            4.2e-05   13.4   0.0   0.00014   11.7   0.0   1.9   1   0   0   1   1   1   1 RRE-LanB fusion protein in a 3-thiaglutamate cluster
PqqD_RRE              RREFam006.1 938293.PRJEB85.HG003691_78 -            2.8e-09   26.2   0.0   3.7e-08   22.6   0.0   2.0   1   1   1   2   2   2   1 RRE-containing protein in a pyrroloquinoline cluster
Thurincin_rSAM_RRE    RREFam019.1 938293.PRJEB85.HG003691_78 -            3.7e-08   22.8   0.5     5e-08   22.4   0.4   1.5   1   1   0   1   1   1   1 RRE-containing rSAM protein in a thurincin sactipeptide cluster
Stand_Alone_Lasso_RRE RREFam002.1 938293.PRJEB85.HG003691_78 -            5.9e-06   15.8   0.0   7.9e-06   15.4   0.0   1.2   1   0   0   1   1   1   1 Stand-alone RRE protein in a lasso peptide cluster
PqqD_RRE             RREFam006.1 938293.PRJEB85.HG003685_119 -            7.8e-05   11.9   0.0   0.00021   10.5   0.0   1.7   1   0   0   1   1   1   1 RRE-containing protein in a pyrroloquinoline cluster
Ranthipeptide_rSAM_RRE RREFam024.1 938293.PRJEB85.HG003686_714 -            2.5e-26   81.3   0.5   8.7e-26   79.6   0.5   2.0   1   0   0   1   1   1   1 RRE-containing rSAM protein in a ranthipeptide/SCIFF cluster
Thuricin_rSAM_RRE      RREFam020.1 938293.PRJEB85.HG003686_714 -            2.9e-10   29.7   3.4   2.9e-10   29.7   3.4   2.4   3   0   0   3   3   3   1 RRE-containing rSAM protein in a thuricin sactipeptide cluster
Other_Sactipeptide_rSAM_RRE RREFam021.1 938293.PRJEB85.HG003686_827 -            1.6e-05   14.4   3.1    0.0011    8.4   0.1   2.5   2   0   0   2   2   2   2 RRE-containing rSAM protein in a sactipeptide cluster
#
# Program:         hmmscan
# Version:         3.4 (Aug 2023)
# Pipeline mode:   SCAN
# Query file:      938293.PRJEB85.HG003687.faa
# Target file:     ../hmms/db/RREFam.hmm
# Option settings: hmmscan --tblout ../tables/RREFam.scan.tbl ../hmms/db/RREFam.hmm 938293.PRJEB85.HG003687.faa 
# Current dir:     /home/althonos/Code/pyhmmer/src/pyhmmer/tests/data/seqs
# Date:            Sat Jan 10 13:08:17 2026
# [ok]
