Gene_1_symbol(5end_fusion_partner)	Gene_2_symbol(3end_fusion_partner)	Fusion_description	Counts_of_common_mapping_reads	Spanning_pairs	Spanning_unique_reads	Longest_anchor_found	Fusion_finding_method	Fusion_point_for_gene_1(5end_fusion_partner)	Fusion_point_for_gene_2(3end_fusion_partner)	Gene_1_id(5end_fusion_partner)	Gene_2_id(3end_fusion_partner)	Exon_1_id(5end_fusion_partner)	Exon_2_id(3end_fusion_partner)	Fusion_sequence	Predicted_effect
EWSR1	ATF1	known,oncogene,cosmic,cgp,ticdb,chimerdb3kb,chimerdb3pub,chimerdb3seq,cancer,tumor,m99,exon-exon	0	340	23	25	BOWTIE	22:29287134:+	12:50814280:+	ENSG00000182944	ENSG00000123268	ENSE00003570564	ENSE00003675908	CAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAGA*CTGCATCAGGAGATATGCAAACATATCAGATCCGAAC	in-frame
TMPRSS2	ETV1	known,oncogene,cosmic,chimerdb2,cgp,ticdb,chimerdb3kb,chimerdb3pub,chimerdb3seq,cancer,tumor,tcga-cancer	0	331	16	25	BOWTIE+BLAT	21:41494380:-	7:13935843:-	ENSG00000184012	ENSG00000006468			GGTCCTGACGCAGGCTTCCAACCCCGTCGTCTGCACGCAGCCCAAATCCC*CATCCAGCACGCCAGTGTCCCCACTGCATCATGCATCTCCAAACTCAACT	in-frame
AKAP9	BRAF	known,oncogene,cosmic,chimerdb2,cgp,ticdb,chimerdb3kb,chimerdb3pub,chimerdb3seq,cancer,tumor,exon-exon	0	308	21	25	BOWTIE	7:92003235:+	7:140787584:-	ENSG00000127914	ENSG00000157764	ENSE00003484877	ENSE00003680515	ACTTCAGAAAGAACTCAATGTACTTAAATCAGAACAG*GACTTGATTAGAGACCAAGGATTTCGTGGTGATGGAG	in-frame
ETV6	NTRK3	known,oncogene,cosmic,chimerdb2,cgp,ticdb,tcga,cell_lines,18cancers,chimerdb3kb,chimerdb3pub,chimerdb3seq,cancer,tumor,tcga-cancer,exon-exon	0	272	23	25	BOWTIE	12:11869969:+	15:87940753:-	ENSG00000139083	ENSG00000140538	ENSE00001788162	ENSE00001134154	CCTGAAGAGCACGCCATGCCCATTGGGAGAATAGCAG*ATGTGCAGCACATTAAGAGGAGAGACATCGTGCTGAA	in-frame
EWSR1	FLI1	known,oncogene,cosmic,cgp,ticdb,cell_lines,chimerdb3kb,chimerdb3pub,chimerdb3seq,cancer,tumor,m69,exon-exon	0	268	22	25	BOWTIE	22:29287134:+	11:128807180:+	ENSG00000182944	ENSG00000151702	ENSE00003570564	ENSE00003702967	CAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAGA*GTCCTCCCCTTGGAGGGGCACAAACGATCAGTAAGAA	in-frame
HOOK3	RET	known,oncogene,cosmic,cgp,ticdb,chimerdb3kb,chimerdb3pub,chimerdb3seq,cancer,tumor,exon-exon	0	260	20	25	BOWTIE	8:42968214:+	10:43116584:+	ENSG00000168172	ENSG00000165731	ENSE00003485179	ENSE00001095944	CGCAGCGCGAAGTCAACTTGAAACCTACAAGAGACAG*GAGGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGG	in-frame
BRD4	NUTM1	known,oncogene,cosmic,chimerdb2,cgp,ticdb,cell_lines,chimerdb3kb,chimerdb3pub,chimerdb3seq,cancer,exon-exon	0	213	20	24	BOWTIE	19:15254152:-	15:34347969:+	ENSG00000141867	ENSG00000184507	ENSE00001187704	ENSE00001367212	GAGTCCAGCTCCTCTGACAGCGAAGACTCCGAAACAG*CATCTGCATTGCCGGGACCGGATATGAGCATGAAACC	in-frame
CD74	ROS1	known,oncogene,cosmic,chimerdb2,cgp,ticdb,tcga,cell_lines,18cancers,chimerdb3kb,chimerdb3pub,chimerdb3seq,cancer,tumor,tcga-cancer,exon-exon	0	124	22	25	BOWTIE	5:150404680:-	6:117324415:-	ENSG00000019582	ENSG00000047936	ENSE00000841201	ENSE00000762702	TCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAG*ATGATTTTTGGATACCAGAAACAAGTTTCATACTTAC	in-frame
