Metadata-Version: 1.1
Name: pydiffmap
Version: 0.1.0rc1
Summary: Library for constructing variable bandwidth diffusion maps
Home-page: https://github.com/DiffusionMapsAcademics/pyDiffMap
Author: Ralf Banisch, Erik Henning Thiede, Zofia Trstanova
Author-email: ralf.banisch@fu-berlin.de, ehthiede@gmail.com, zofia.trstanova@ed.ac.uk
License: GPL license
Description-Content-Type: UNKNOWN
Description: ========
        Overview
        ========
        
        
        
        This is the home of the documentation for pyDiffMap, an open-source project to develop a robust and accessible diffusion map code for public use. Our documentation is currently under construction, please bear with us.
        
        * Free software: GPL
        
        Installation
        ============
        
        Pydiffmap is installable using pip.  You can install it using the command
        
        ::
        
            pip install pyDiffMap
        
        In the meantime, you can install the package directly from the source directly by downloading the package from github and running the command below, optionally with the "-e" flag for an editable install.
        
        ::
            
            pip install [source_directory]
        
        Documentation
        =============
        
        https://pyDiffMap.readthedocs.io/
        
        Development
        ===========
        
        To run the all tests run::
        
            tox
        
        Note, to combine the coverage data from all the tox environments run:
        
        .. list-table::
            :widths: 10 90
            :stub-columns: 1
        
            - - Windows
              - ::
        
                    set PYTEST_ADDOPTS=--cov-append
                    tox
        
            - - Other
              - ::
        
                    PYTEST_ADDOPTS=--cov-append tox
        
        If you don't have tox installed, you can also run the python tests directly with 
        
        ::
            
            pytest
        
        
        
        Changelog
        =========
        
        0.1.0 (2017-12-06)
        ------------------
        
        * Added base functionality to the code.
        
Keywords: diffusion maps,manifold learning,molecular dynamics,dimensionality reduction
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Topic :: Scientific/Engineering
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: Unix
Classifier: Operating System :: POSIX
Classifier: Operating System :: Microsoft :: Windows
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Scientific/Engineering
