Metadata-Version: 2.1
Name: pycircos
Version: 1.0.2
Summary: This Tools is Design for NGS Circos Plot with using Python.
Home-page: https://github.com/KimBioInfoStudio/PyCircos
Author: Yunfei Wang, Baochen Yang
Author-email: yfwang0405@gmail.com, yangbaochen1217@gmail.com
License: AGPLv3
Keywords: Python NGS Circos Plot
Platform: UNKNOWN
Classifier: Environment :: Console
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: Free for non-commercial use
Classifier: License :: OSI Approved :: GNU General Public License (GPL)
Classifier: Operating System :: Unix
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: Microsoft :: Windows
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.5

# Python Modules for Circos Plot

[![Build Status](https://travis-ci.com/KimBioInfoStudio/PyCircos.svg?branch=develop)](https://travis-ci.com/KimBioInfoStudio/PyCircos)
![codecov](https://codecov.io/gh/KimBioInfoStudio/PyCircos/branch/develop/graph/badge.svg)



## 1. Pre Installation

> As official, Pyhton2 will end life form 2020-1-1, So we develop a new version support Python3.5+, We deeply recommand all users using the python version 3.5+, Thx!

### Python 3.5+ packages(automatically installed)

1. numpy
2. pandas
3. matplotlib


## 2. Installation
### intall dev branch

1. install from source code 

```
git clone https://github.com/KimBioInfoStudio/PyCircos.git
cd PyCircos
pip install -r requirements.txt
python3 setup.py install [--user]
```

2. or install form source code with using 'make'

```
git clone https://github.com/KimBioInfoStudio/PyCircos.git
cd PyCircos
make install 
```

3. install release branch

```
pip install pycircos
```

## 3. Examples
### command

```
cd ./test/
python3 test.py
open ./demo.png
``` 
### results

![](./test/demo.png)





