LICENSE
MANIFEST.in
README.md
setup.py
include/abpoa.h
include/simd_instruction.h
include/simde/simde/check.h
include/simde/simde/debug-trap.h
include/simde/simde/hedley.h
include/simde/simde/simde-align.h
include/simde/simde/simde-arch.h
include/simde/simde/simde-common.h
include/simde/simde/simde-complex.h
include/simde/simde/simde-constify.h
include/simde/simde/simde-detect-clang.h
include/simde/simde/simde-diagnostic.h
include/simde/simde/simde-f16.h
include/simde/simde/simde-features.h
include/simde/simde/simde-math.h
include/simde/simde/arm/neon.h
include/simde/simde/arm/sve.h
include/simde/simde/arm/neon/aba.h
include/simde/simde/arm/neon/abd.h
include/simde/simde/arm/neon/abdl.h
include/simde/simde/arm/neon/abs.h
include/simde/simde/arm/neon/add.h
include/simde/simde/arm/neon/addhn.h
include/simde/simde/arm/neon/addl.h
include/simde/simde/arm/neon/addl_high.h
include/simde/simde/arm/neon/addlv.h
include/simde/simde/arm/neon/addv.h
include/simde/simde/arm/neon/addw.h
include/simde/simde/arm/neon/addw_high.h
include/simde/simde/arm/neon/and.h
include/simde/simde/arm/neon/bcax.h
include/simde/simde/arm/neon/bic.h
include/simde/simde/arm/neon/bsl.h
include/simde/simde/arm/neon/cage.h
include/simde/simde/arm/neon/cagt.h
include/simde/simde/arm/neon/ceq.h
include/simde/simde/arm/neon/ceqz.h
include/simde/simde/arm/neon/cge.h
include/simde/simde/arm/neon/cgez.h
include/simde/simde/arm/neon/cgt.h
include/simde/simde/arm/neon/cgtz.h
include/simde/simde/arm/neon/cle.h
include/simde/simde/arm/neon/clez.h
include/simde/simde/arm/neon/cls.h
include/simde/simde/arm/neon/clt.h
include/simde/simde/arm/neon/cltz.h
include/simde/simde/arm/neon/clz.h
include/simde/simde/arm/neon/cmla.h
include/simde/simde/arm/neon/cmla_rot180.h
include/simde/simde/arm/neon/cmla_rot270.h
include/simde/simde/arm/neon/cmla_rot90.h
include/simde/simde/arm/neon/cnt.h
include/simde/simde/arm/neon/combine.h
include/simde/simde/arm/neon/create.h
include/simde/simde/arm/neon/cvt.h
include/simde/simde/arm/neon/dot.h
include/simde/simde/arm/neon/dot_lane.h
include/simde/simde/arm/neon/dup_lane.h
include/simde/simde/arm/neon/dup_n.h
include/simde/simde/arm/neon/eor.h
include/simde/simde/arm/neon/ext.h
include/simde/simde/arm/neon/fma.h
include/simde/simde/arm/neon/fma_lane.h
include/simde/simde/arm/neon/fma_n.h
include/simde/simde/arm/neon/get_high.h
include/simde/simde/arm/neon/get_lane.h
include/simde/simde/arm/neon/get_low.h
include/simde/simde/arm/neon/hadd.h
include/simde/simde/arm/neon/hsub.h
include/simde/simde/arm/neon/ld1.h
include/simde/simde/arm/neon/ld1_dup.h
include/simde/simde/arm/neon/ld1_lane.h
include/simde/simde/arm/neon/ld2.h
include/simde/simde/arm/neon/ld3.h
include/simde/simde/arm/neon/ld4.h
include/simde/simde/arm/neon/ld4_lane.h
include/simde/simde/arm/neon/max.h
include/simde/simde/arm/neon/maxnm.h
include/simde/simde/arm/neon/maxv.h
include/simde/simde/arm/neon/min.h
include/simde/simde/arm/neon/minnm.h
include/simde/simde/arm/neon/minv.h
include/simde/simde/arm/neon/mla.h
include/simde/simde/arm/neon/mla_n.h
include/simde/simde/arm/neon/mlal.h
include/simde/simde/arm/neon/mlal_high.h
include/simde/simde/arm/neon/mlal_high_n.h
include/simde/simde/arm/neon/mlal_lane.h
include/simde/simde/arm/neon/mlal_n.h
include/simde/simde/arm/neon/mls.h
include/simde/simde/arm/neon/mls_n.h
include/simde/simde/arm/neon/mlsl.h
include/simde/simde/arm/neon/mlsl_high.h
include/simde/simde/arm/neon/mlsl_high_n.h
include/simde/simde/arm/neon/mlsl_lane.h
include/simde/simde/arm/neon/mlsl_n.h
include/simde/simde/arm/neon/movl.h
include/simde/simde/arm/neon/movl_high.h
include/simde/simde/arm/neon/movn.h
include/simde/simde/arm/neon/movn_high.h
include/simde/simde/arm/neon/mul.h
include/simde/simde/arm/neon/mul_lane.h
include/simde/simde/arm/neon/mul_n.h
include/simde/simde/arm/neon/mull.h
include/simde/simde/arm/neon/mull_high.h
include/simde/simde/arm/neon/mull_lane.h
include/simde/simde/arm/neon/mull_n.h
include/simde/simde/arm/neon/mvn.h
include/simde/simde/arm/neon/neg.h
include/simde/simde/arm/neon/orn.h
include/simde/simde/arm/neon/orr.h
include/simde/simde/arm/neon/padal.h
include/simde/simde/arm/neon/padd.h
include/simde/simde/arm/neon/paddl.h
include/simde/simde/arm/neon/pmax.h
include/simde/simde/arm/neon/pmin.h
include/simde/simde/arm/neon/qabs.h
include/simde/simde/arm/neon/qadd.h
include/simde/simde/arm/neon/qdmulh.h
include/simde/simde/arm/neon/qdmulh_lane.h
include/simde/simde/arm/neon/qdmulh_n.h
include/simde/simde/arm/neon/qdmull.h
include/simde/simde/arm/neon/qmovn.h
include/simde/simde/arm/neon/qmovn_high.h
include/simde/simde/arm/neon/qmovun.h
include/simde/simde/arm/neon/qneg.h
include/simde/simde/arm/neon/qrdmulh.h
include/simde/simde/arm/neon/qrdmulh_lane.h
include/simde/simde/arm/neon/qrdmulh_n.h
include/simde/simde/arm/neon/qrshrn_n.h
include/simde/simde/arm/neon/qrshrun_n.h
include/simde/simde/arm/neon/qshl.h
include/simde/simde/arm/neon/qshlu_n.h
include/simde/simde/arm/neon/qshrn_n.h
include/simde/simde/arm/neon/qshrun_n.h
include/simde/simde/arm/neon/qsub.h
include/simde/simde/arm/neon/qtbl.h
include/simde/simde/arm/neon/qtbx.h
include/simde/simde/arm/neon/rbit.h
include/simde/simde/arm/neon/recpe.h
include/simde/simde/arm/neon/recps.h
include/simde/simde/arm/neon/reinterpret.h
include/simde/simde/arm/neon/rev16.h
include/simde/simde/arm/neon/rev32.h
include/simde/simde/arm/neon/rev64.h
include/simde/simde/arm/neon/rhadd.h
include/simde/simde/arm/neon/rnd.h
include/simde/simde/arm/neon/rndi.h
include/simde/simde/arm/neon/rndm.h
include/simde/simde/arm/neon/rndn.h
include/simde/simde/arm/neon/rndp.h
include/simde/simde/arm/neon/rshl.h
include/simde/simde/arm/neon/rshr_n.h
include/simde/simde/arm/neon/rshrn_n.h
include/simde/simde/arm/neon/rsqrte.h
include/simde/simde/arm/neon/rsqrts.h
include/simde/simde/arm/neon/rsra_n.h
include/simde/simde/arm/neon/set_lane.h
include/simde/simde/arm/neon/shl.h
include/simde/simde/arm/neon/shl_n.h
include/simde/simde/arm/neon/shll_n.h
include/simde/simde/arm/neon/shr_n.h
include/simde/simde/arm/neon/shrn_n.h
include/simde/simde/arm/neon/sqadd.h
include/simde/simde/arm/neon/sra_n.h
include/simde/simde/arm/neon/sri_n.h
include/simde/simde/arm/neon/st1.h
include/simde/simde/arm/neon/st1_lane.h
include/simde/simde/arm/neon/st2.h
include/simde/simde/arm/neon/st2_lane.h
include/simde/simde/arm/neon/st3.h
include/simde/simde/arm/neon/st3_lane.h
include/simde/simde/arm/neon/st4.h
include/simde/simde/arm/neon/st4_lane.h
include/simde/simde/arm/neon/sub.h
include/simde/simde/arm/neon/subhn.h
include/simde/simde/arm/neon/subl.h
include/simde/simde/arm/neon/subl_high.h
include/simde/simde/arm/neon/subw.h
include/simde/simde/arm/neon/subw_high.h
include/simde/simde/arm/neon/tbl.h
include/simde/simde/arm/neon/tbx.h
include/simde/simde/arm/neon/trn.h
include/simde/simde/arm/neon/trn1.h
include/simde/simde/arm/neon/trn2.h
include/simde/simde/arm/neon/tst.h
include/simde/simde/arm/neon/types.h
include/simde/simde/arm/neon/uqadd.h
include/simde/simde/arm/neon/uzp.h
include/simde/simde/arm/neon/uzp1.h
include/simde/simde/arm/neon/uzp2.h
include/simde/simde/arm/neon/xar.h
include/simde/simde/arm/neon/zip.h
include/simde/simde/arm/neon/zip1.h
include/simde/simde/arm/neon/zip2.h
include/simde/simde/arm/sve/add.h
include/simde/simde/arm/sve/and.h
include/simde/simde/arm/sve/cmplt.h
include/simde/simde/arm/sve/cnt.h
include/simde/simde/arm/sve/dup.h
include/simde/simde/arm/sve/ld1.h
include/simde/simde/arm/sve/ptest.h
include/simde/simde/arm/sve/ptrue.h
include/simde/simde/arm/sve/qadd.h
include/simde/simde/arm/sve/reinterpret.h
include/simde/simde/arm/sve/sel.h
include/simde/simde/arm/sve/st1.h
include/simde/simde/arm/sve/sub.h
include/simde/simde/arm/sve/types.h
include/simde/simde/arm/sve/whilelt.h
include/simde/simde/mips/msa.h
include/simde/simde/mips/msa/add_a.h
include/simde/simde/mips/msa/adds.h
include/simde/simde/mips/msa/adds_a.h
include/simde/simde/mips/msa/addv.h
include/simde/simde/mips/msa/addvi.h
include/simde/simde/mips/msa/and.h
include/simde/simde/mips/msa/andi.h
include/simde/simde/mips/msa/ld.h
include/simde/simde/mips/msa/madd.h
include/simde/simde/mips/msa/st.h
include/simde/simde/mips/msa/subv.h
include/simde/simde/mips/msa/types.h
include/simde/simde/wasm/relaxed-simd.h
include/simde/simde/wasm/simd128.h
include/simde/simde/x86/avx.h
include/simde/simde/x86/avx2.h
include/simde/simde/x86/avx512.h
include/simde/simde/x86/clmul.h
include/simde/simde/x86/f16c.h
include/simde/simde/x86/fma.h
include/simde/simde/x86/gfni.h
include/simde/simde/x86/mmx.h
include/simde/simde/x86/sse.h
include/simde/simde/x86/sse2.h
include/simde/simde/x86/sse3.h
include/simde/simde/x86/sse4.1.h
include/simde/simde/x86/sse4.2.h
include/simde/simde/x86/ssse3.h
include/simde/simde/x86/svml.h
include/simde/simde/x86/xop.h
include/simde/simde/x86/avx512/2intersect.h
include/simde/simde/x86/avx512/4dpwssd.h
include/simde/simde/x86/avx512/4dpwssds.h
include/simde/simde/x86/avx512/abs.h
include/simde/simde/x86/avx512/add.h
include/simde/simde/x86/avx512/adds.h
include/simde/simde/x86/avx512/and.h
include/simde/simde/x86/avx512/andnot.h
include/simde/simde/x86/avx512/avg.h
include/simde/simde/x86/avx512/bitshuffle.h
include/simde/simde/x86/avx512/blend.h
include/simde/simde/x86/avx512/broadcast.h
include/simde/simde/x86/avx512/cast.h
include/simde/simde/x86/avx512/cmp.h
include/simde/simde/x86/avx512/cmpeq.h
include/simde/simde/x86/avx512/cmpge.h
include/simde/simde/x86/avx512/cmpgt.h
include/simde/simde/x86/avx512/cmple.h
include/simde/simde/x86/avx512/cmplt.h
include/simde/simde/x86/avx512/cmpneq.h
include/simde/simde/x86/avx512/compress.h
include/simde/simde/x86/avx512/conflict.h
include/simde/simde/x86/avx512/copysign.h
include/simde/simde/x86/avx512/cvt.h
include/simde/simde/x86/avx512/cvts.h
include/simde/simde/x86/avx512/cvtt.h
include/simde/simde/x86/avx512/dbsad.h
include/simde/simde/x86/avx512/div.h
include/simde/simde/x86/avx512/dpbf16.h
include/simde/simde/x86/avx512/dpbusd.h
include/simde/simde/x86/avx512/dpbusds.h
include/simde/simde/x86/avx512/dpwssd.h
include/simde/simde/x86/avx512/dpwssds.h
include/simde/simde/x86/avx512/expand.h
include/simde/simde/x86/avx512/extract.h
include/simde/simde/x86/avx512/fixupimm.h
include/simde/simde/x86/avx512/fixupimm_round.h
include/simde/simde/x86/avx512/flushsubnormal.h
include/simde/simde/x86/avx512/fmadd.h
include/simde/simde/x86/avx512/fmsub.h
include/simde/simde/x86/avx512/fnmadd.h
include/simde/simde/x86/avx512/fnmsub.h
include/simde/simde/x86/avx512/insert.h
include/simde/simde/x86/avx512/kshift.h
include/simde/simde/x86/avx512/load.h
include/simde/simde/x86/avx512/loadu.h
include/simde/simde/x86/avx512/lzcnt.h
include/simde/simde/x86/avx512/madd.h
include/simde/simde/x86/avx512/maddubs.h
include/simde/simde/x86/avx512/max.h
include/simde/simde/x86/avx512/min.h
include/simde/simde/x86/avx512/mov.h
include/simde/simde/x86/avx512/mov_mask.h
include/simde/simde/x86/avx512/movm.h
include/simde/simde/x86/avx512/mul.h
include/simde/simde/x86/avx512/mulhi.h
include/simde/simde/x86/avx512/mulhrs.h
include/simde/simde/x86/avx512/mullo.h
include/simde/simde/x86/avx512/multishift.h
include/simde/simde/x86/avx512/negate.h
include/simde/simde/x86/avx512/or.h
include/simde/simde/x86/avx512/packs.h
include/simde/simde/x86/avx512/packus.h
include/simde/simde/x86/avx512/permutex2var.h
include/simde/simde/x86/avx512/permutexvar.h
include/simde/simde/x86/avx512/popcnt.h
include/simde/simde/x86/avx512/range.h
include/simde/simde/x86/avx512/range_round.h
include/simde/simde/x86/avx512/rol.h
include/simde/simde/x86/avx512/rolv.h
include/simde/simde/x86/avx512/ror.h
include/simde/simde/x86/avx512/rorv.h
include/simde/simde/x86/avx512/round.h
include/simde/simde/x86/avx512/roundscale.h
include/simde/simde/x86/avx512/roundscale_round.h
include/simde/simde/x86/avx512/sad.h
include/simde/simde/x86/avx512/scalef.h
include/simde/simde/x86/avx512/set.h
include/simde/simde/x86/avx512/set1.h
include/simde/simde/x86/avx512/set4.h
include/simde/simde/x86/avx512/setone.h
include/simde/simde/x86/avx512/setr.h
include/simde/simde/x86/avx512/setr4.h
include/simde/simde/x86/avx512/setzero.h
include/simde/simde/x86/avx512/shldv.h
include/simde/simde/x86/avx512/shuffle.h
include/simde/simde/x86/avx512/sll.h
include/simde/simde/x86/avx512/slli.h
include/simde/simde/x86/avx512/sllv.h
include/simde/simde/x86/avx512/sqrt.h
include/simde/simde/x86/avx512/sra.h
include/simde/simde/x86/avx512/srai.h
include/simde/simde/x86/avx512/srav.h
include/simde/simde/x86/avx512/srl.h
include/simde/simde/x86/avx512/srli.h
include/simde/simde/x86/avx512/srlv.h
include/simde/simde/x86/avx512/store.h
include/simde/simde/x86/avx512/storeu.h
include/simde/simde/x86/avx512/sub.h
include/simde/simde/x86/avx512/subs.h
include/simde/simde/x86/avx512/ternarylogic.h
include/simde/simde/x86/avx512/test.h
include/simde/simde/x86/avx512/testn.h
include/simde/simde/x86/avx512/types.h
include/simde/simde/x86/avx512/unpackhi.h
include/simde/simde/x86/avx512/unpacklo.h
include/simde/simde/x86/avx512/xor.h
include/simde/simde/x86/avx512/xorsign.h
include/simde/test/declare-suites.h
include/simde/test/run-tests.h
include/simde/test/test.h
include/simde/test/arm/declare-suites.h
include/simde/test/arm/run-tests.h
include/simde/test/arm/test-arm.h
include/simde/test/arm/neon/run-tests-neon.h
include/simde/test/arm/neon/run-tests.h
include/simde/test/arm/neon/test-neon-footer.h
include/simde/test/arm/neon/test-neon.h
include/simde/test/arm/sve/run-tests-neon.h
include/simde/test/arm/sve/run-tests.h
include/simde/test/arm/sve/test-sve-footer.h
include/simde/test/arm/sve/test-sve.h
include/simde/test/mips/declare-suites.h
include/simde/test/mips/run-tests.h
include/simde/test/mips/msa/run-tests-msa.h
include/simde/test/mips/msa/run-tests.h
include/simde/test/mips/msa/test-msa-footer.h
include/simde/test/mips/msa/test-msa.h
include/simde/test/wasm/declare-suites.h
include/simde/test/wasm/run-tests.h
include/simde/test/wasm/test-simd128-footer.h
include/simde/test/wasm/test-simd128.h
include/simde/test/wasm/relaxed-simd/run-tests-wasm.h
include/simde/test/wasm/relaxed-simd/run-tests.h
include/simde/test/wasm/relaxed-simd/test-relaxed-simd-footer.h
include/simde/test/wasm/relaxed-simd/test-relaxed-simd.h
include/simde/test/wasm/simd128/run-tests-wasm.h
include/simde/test/wasm/simd128/run-tests.h
include/simde/test/wasm/simd128/test-simd128-footer.h
include/simde/test/wasm/simd128/test-simd128.h
include/simde/test/x86/run-tests.h
include/simde/test/x86/test-avx.h
include/simde/test/x86/test-mmx.h
include/simde/test/x86/test-sse.h
include/simde/test/x86/test-sse2.h
include/simde/test/x86/test-x86-footer.h
include/simde/test/x86/test-x86.h
include/simde/test/x86/avx512/run-tests.h
include/simde/test/x86/avx512/test-avx512-footer.h
include/simde/test/x86/avx512/test-avx512.h
pyabpoa.egg-info/PKG-INFO
pyabpoa.egg-info/SOURCES.txt
pyabpoa.egg-info/dependency_links.txt
pyabpoa.egg-info/top_level.txt
python/README.md
python/cabpoa.pxd
python/pyabpoa.pyx
src/abpoa.h
src/abpoa_align.c
src/abpoa_align.h
src/abpoa_graph.c
src/abpoa_graph.h
src/abpoa_output.c
src/abpoa_output.h
src/abpoa_plot.c
src/abpoa_seed.c
src/abpoa_seed.h
src/abpoa_seq.c
src/abpoa_seq.h
src/kalloc.c
src/kalloc.h
src/kdq.h
src/khash.h
src/kseq.h
src/ksort.h
src/kstring.c
src/kstring.h
src/kvec.h
src/simd_abpoa_align.c
src/simd_abpoa_align.h
src/simd_check.c
src/simd_instruction.h
src/utils.c
src/utils.h