ECG R Peak detectors: hrv.HRV Class Reference

ECG R Peak detectors A collection of ECG heartbeat detection algorithms implemented in Python: https://github.com/berndporr/py-ecg-detectors

Public Member Functions | Public Attributes | List of all members
hrv.HRV Class Reference

## Public Member Functions
def | __init__ (self, sampling_frequency)
def | SDNN (self, rr_samples, normalise=False)
def | SDANN (self, rr_samples, average_period=5.0, normalise=False)
def | RMSSD (self, rr_samples, normalise=False)
def | SDSD (self, rr_samples)
def | NN50 (self, rr_samples)
def | pNN50 (self, rr_samples)
def | NN20 (self, rr_samples)
def | pNN20 (self, rr_samples)
def | HR (self, rr_samples)
def | add_rr_error (self, rr_samples, error)
def | fAnalysis (self, rr_samples)

## Public Attributes
| fs
| period
| hr_discrete
| t_hr_discrete
| hr_func
| t_hr_linear
| hr_linear
| f_hr
| f_hr_axis
| lf
| hf

## Detailed Description

    Heartrate variability class which calcualtes the standard HRV
    parameters with the help of Python functions and for cross
    validation also via the physionet's get_hrv script.

## Constructor & Destructor Documentation

## ◆ __init__()

def hrv.HRV.__init__ | ( |  | self,
|  |  | sampling_frequency
| ) |  |

    Constructor takes the sampling frequency.
    All rr_sample data is in sample number and
    will assume it's at this sampling rate.

## Member Function Documentation

## ◆ add_rr_error()

def hrv.HRV.add_rr_error | ( |  | self,
|  |  | rr_samples,
|  |  | error
| ) |  |

    Adds jitter to the heartrate timestamps.
    The error and the rr_samples are in timestamps.
    Returns the noisy timestamps in samples.

## ◆ fAnalysis()

def hrv.HRV.fAnalysis | ( |  | self,
|  |  | rr_samples
| ) |  |

    Frequency analysis to calc self.lf, self.hf, returns the LF/HF-ratio and
    also calculates the spectrum as pairs of (self.f_hr_axis,self.f_hr).
    The input arrary is in sample points where R peaks have been detected.

## ◆ HR()

def hrv.HRV.HR | ( |  | self,
|  |  | rr_samples
| ) |  |

    Calculate heart-rates from R peak samples.

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :return: Heart-rates in BPM
    :rtype: ndarray

## ◆ NN20()

def hrv.HRV.NN20 | ( |  | self,
|  |  | rr_samples
| ) |  |

    Calculate NN20, the number of pairs of successive NNs that differ by more than 20 ms.

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :return: NN20
    :rtype: float

## ◆ NN50()

def hrv.HRV.NN50 | ( |  | self,
|  |  | rr_samples
| ) |  |

    Calculate NN50, the number of pairs of successive NNs that differ by more than 50 ms.

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :return: NN50
    :rtype: float

## ◆ pNN20()

def hrv.HRV.pNN20 | ( |  | self,
|  |  | rr_samples
| ) |  |

    Calculate pNN20, the proportion of NN20 divided by total number of NNs.

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :return: pNN20
    :rtype: float

## ◆ pNN50()

def hrv.HRV.pNN50 | ( |  | self,
|  |  | rr_samples
| ) |  |

    Calculate pNN50, the proportion of NN50 divided by total number of NNs.

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :return: pNN50
    :rtype: float

## ◆ RMSSD()

def hrv.HRV.RMSSD | ( |  | self,
|  |  | rr_samples,
|  |  | normalise = `False`
| ) |  |

    Calculate RMSSD (root mean square of successive differences).

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :param normalise: normalise the RMSSD against the average RR interval, defaults to False
    :type normalise: bool, optional
    :return: RMSSD (root mean square of successive differences)
    :rtype: float

## ◆ SDANN()

def hrv.HRV.SDANN | ( |  | self,
|  |  | rr_samples,
|  |  | average_period = `5.0`,
|  |  | normalise = `False`
| ) |  |

    Calculate SDANN, the standard deviation of the average RR intervals calculated over short periods.

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :param average_period: The averging period in minutes, defaults to 5.0
    :type average_period: float, optional
    :param normalise: normalise the SDANN against the average RR interval, defaults to False
    :type normalise: bool, optional
    :return: SDANN, the standard deviation of the average RR intervals calculated over short periods
    :rtype: float

## ◆ SDNN()

def hrv.HRV.SDNN | ( |  | self,
|  |  | rr_samples,
|  |  | normalise = `False`
| ) |  |

    Calculate SDNN, the standard deviation of NN intervals.

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :param normalise: normalise the SDNN against the average RR interval, defaults to False
    :type normalise: bool, optional
    :return: SDNN, the standard deviation of NN intervals
    :rtype: float

## ◆ SDSD()

def hrv.HRV.SDSD | ( |  | self,
|  |  | rr_samples
| ) |  |

    Calculate SDSD (standard deviation of successive differences), the standard deviation of the successive differences between adjacent NNs.

    :param rr_samples: R peak sample locations
    :type rr_samples: array_like
    :return: SDSD (standard deviation of successive differences)
    :rtype: float

The documentation for this class was generated from the following file:

- hrv.py