=============
ECG Detectors
=============

A collection of 7 ECG heartbeat detection algorithms implemented in Python. Developed in conjunction with a new ECG database: http://researchdata.gla.ac.uk/716/. This repository also contains a testing class for the MITDB and the new University of Glasgow database. In addition the module `hrv` provides tools to
analyse heartrate variability.


ECG Detector Class Usage
========================

Before the detectors can be used the class must first be initalised with the sampling rate of the ECG recording:

.. code-block:: python

  from ecgdetectors import Detectors
  detectors = Detectors(fs)

See usage_example.py for an example of how to use the detectors.

Hamilton
--------

Implementation of P.S. Hamilton, “Open Source ECG Analysis Software Documentation”, E.P.Limited, 2002. Usage::
  
  r_peaks = detectors.hamilton_detector(unfiltered_ecg)

  
Christov
--------

Implementation of Ivaylo I. Christov, “Real time electrocardiogram QRS detection using combined adaptive threshold”, BioMedical Engineering OnLine 2004, vol. 3:28, 2004. Usage::

  r_peaks = detectors.christov_detector(unfiltered_ecg)


Engelse and Zeelenberg
----------------------

Implementation of W. Engelse and C. Zeelenberg, “A single scan algorithm for QRS detection and feature extraction”, IEEE Comp. in Cardiology, vol. 6, pp. 37-42, 1979 with modifications A. Lourenco, H. Silva, P. Leite, R. Lourenco and A. Fred, “Real Time Electrocardiogram Segmentation for Finger Based ECG Biometrics”, BIOSIGNALS 2012, pp. 49-54, 2012. Usage::
  
  r_peaks = detectors.engzee_detector(unfiltered_ecg)



Pan and Tompkins
----------------

Implementation of Jiapu Pan and Willis J. Tompkins. “A Real-Time QRS Detection Algorithm”. In: IEEE Transactions on Biomedical Engineering BME-32.3 (1985), pp. 230–236. Usage::
  
  r_peaks = detectors.pan_tompkins_detector(unfiltered_ecg)


Stationary Wavelet Transform
----------------------------

Implementation based on Vignesh Kalidas and Lakshman Tamil. “Real-time QRS detector using Stationary Wavelet Transform for Automated ECG Analysis”. In: 2017 IEEE 17th International Conference on Bioinformatics and Bioengineering (BIBE). Uses the Pan and Tompkins thresolding method. Usage::
  
  r_peaks = detectors.swt_detector(unfiltered_ecg)


Two Moving Average
------------------

Implementation of Elgendi, Mohamed & Jonkman, Mirjam & De Boer, Friso. (2010). "Frequency Bands Effects on QRS Detection" The 3rd International Conference on Bio-inspired Systems and Signal Processing (BIOSIGNALS2010). 428-431.
Usage::
  
  r_peaks = detectors.two_average_detector(unfiltered_ecg)

  

Matched Filter
--------------

FIR matched filter using template of QRS complex. Template provided for 250Hz and 360Hz. Uses the Pan and Tompkins thresolding method. Usage::

  r_peaks = detectors.matched_filter_detector(unfiltered_ecg)


Authors
=======

Luis Howell, luisbhowell@gmail.com

Bernd Porr, bernd.porr@glasgow.ac.uk


citation / DOI
==============

DOI: 10.5281/zenodo.3353397 

https://doi.org/10.5281/zenodo.3353397
