"""Protein structure reconstruction modules."""

from pulchra.reconstruction.backbone import rebuild_backbone, prepare_rbins
from pulchra.reconstruction.sidechains import rebuild_sidechains, RotamerLibrary
from pulchra.reconstruction.excluded_volume import (
    SpatialGrid,
    get_conflicts,
    optimize_exvol,
)
from pulchra.reconstruction.chirality import chirality_check
from pulchra.reconstruction.hydrogen_bonds import optimize_backbone, hb_energy

__all__ = [
    "rebuild_backbone",
    "prepare_rbins",
    "rebuild_sidechains",
    "RotamerLibrary",
    "SpatialGrid",
    "get_conflicts",
    "optimize_exvol",
    "chirality_check",
    "optimize_backbone",
    "hb_energy",
]
