LICENSE
README.md
setup.py
proteinnpt/__init__.py
proteinnpt.egg-info/PKG-INFO
proteinnpt.egg-info/SOURCES.txt
proteinnpt.egg-info/dependency_links.txt
proteinnpt.egg-info/top_level.txt
proteinnpt/baselines/__init__.py
proteinnpt/baselines/data_processing.py
proteinnpt/baselines/model.py
proteinnpt/proteinnpt/__init__.py
proteinnpt/proteinnpt/data_processing.py
proteinnpt/proteinnpt/model.py
proteinnpt/utils/__init__.py
proteinnpt/utils/cv_split.py
proteinnpt/utils/data_utils.py
proteinnpt/utils/merge_zero_shot.py
proteinnpt/utils/model_utils.py
proteinnpt/utils/msa_utils.py
proteinnpt/utils/esm/__init__.py
proteinnpt/utils/esm/axial_attention.py
proteinnpt/utils/esm/constants.py
proteinnpt/utils/esm/data.py
proteinnpt/utils/esm/modules.py
proteinnpt/utils/esm/multihead_attention.py
proteinnpt/utils/esm/pretrained.py
proteinnpt/utils/esm/rotary_embedding.py
proteinnpt/utils/esm/version.py
proteinnpt/utils/esm/model/__init__.py
proteinnpt/utils/esm/model/esm1.py
proteinnpt/utils/esm/model/esm2.py
proteinnpt/utils/esm/model/msa_transformer.py
proteinnpt/utils/tranception/__init__.py
proteinnpt/utils/tranception/activations.py
proteinnpt/utils/tranception/config.py
proteinnpt/utils/tranception/model_pytorch.py
proteinnpt/utils/tranception/outputs.py
proteinnpt/utils/tranception/utils/__init__.py
proteinnpt/utils/tranception/utils/dms_utils.py
proteinnpt/utils/tranception/utils/msa_utils.py
proteinnpt/utils/tranception/utils/scoring_utils.py