setup.cfg
setup.py
ProfileNJ.egg-info/PKG-INFO
ProfileNJ.egg-info/SOURCES.txt
ProfileNJ.egg-info/dependency_links.txt
ProfileNJ.egg-info/entry_points.txt
ProfileNJ.egg-info/requires.txt
ProfileNJ.egg-info/top_level.txt
bin/polytomySolver
bin/profileNJ
bin/reconcile
profileNJ/__init__.py
profileNJ/PolytomySolver/Multipolysolver.py
profileNJ/PolytomySolver/PolySolver.py
profileNJ/PolytomySolver/ZhengPolySolver.py
profileNJ/PolytomySolver/__init__.py
profileNJ/TreeLib/ClusterUtils.py
profileNJ/TreeLib/SupportUtils.py
profileNJ/TreeLib/TreeClass.py
profileNJ/TreeLib/TreeUtils.py
profileNJ/TreeLib/__init__.py
profileNJ/TreeLib/memorize.py
profileNJ/TreeLib/params.py
profileNJ/tests/__init__.py
profileNJ/tests/test_Cluster.py
profileNJ/tests/test_Recon.py
profileNJ/tests/test_Solver.py
profileNJ/tests/test_Tree.py
test/test.py