Metadata-Version: 1.1
Name: primer3-py
Version: 0.5.3
Summary: Python bindings for Primer3
Home-page: https://github.com/libnano/primer3-py
Author: Ben Pruitt, Nick Conway
Author-email: bpruittvt@gmail.com
License: GPLv2
Description: =====================================================
         primer3-py: simple oligo analysis and primer design
        =====================================================
        
        .. image:: https://secure.travis-ci.org/libnano/primer3-py.png
          :target: https://travis-ci.org/libnano/primer3-py
        .. image:: https://img.shields.io/pypi/l/primer3-py.png
          :target: http://www.gnu.org/licenses/gpl-2.0.html
        .. image:: https://img.shields.io/pypi/v/primer3-py.png
          :target: https://pypi.python.org/pypi/primer3-py
        
        
        **Primer3-py** is a Python-abstracted API for the popular Primer3 library. The
        intention is to provide a simple and reliable interface for automated oligo
        analysis and design.
        
        Routine oligo analysis is simple::
        
            >>> import primer3
            >>> primer3.calcTm('GTAAAACGACGGCCAGT')
            49.16808228911765
            >>> primer3.calcHairpin('CCCCCATCCGATCAGGGGG')
            ThermoResult(structure_found=True, tm=34.15, dg=337.09, dh=-36300.00,
                         ds=-118.13, msg=)
        
        ... and `fast` (**~1000X** faster than traditional subprocess wrappers)::
        
            In [1]: import primer3
        
            In [2]: %timeit primer3.calcTm('GTAAAACGACGGCCAGT')
            100000 loops, best of 3: 4.74 µs per loop
        
            In [3]: %timeit primer3.wrappers.calcTm('GTAAAACGACGGCCAGT')
            100000 loops, best of 3: 5.78 ms per loop
        
        **Primer3-py** also includes bindings for the Primer3 `primer design engine`
        if you'd prefer to use an established pipeline. The IO parameters mirror those
        of the original Primer3.
        
        **Please note that while we provide bindings, we do not provide support for
        the Primer3 design engine. Please contact the Primer3 dev team with your
        questions: http://primer3.sourceforge.net/.**
        
        A copy of the Primer3 2.3.7 design parameters manual can be found at:
        http://git.io/vnqBx
        
        For documentation of the bindings, see https://libnano.github.io/primer3-py
        
Platform: UNKNOWN
Classifier: Programming Language :: C
Classifier: Programming Language :: Cython
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: GNU General Public License v2 (GPLv2)
