README.md
setup.py
pomoxis/__init__.py
pomoxis/watcher.py
pomoxis.egg-info/PKG-INFO
pomoxis.egg-info/SOURCES.txt
pomoxis.egg-info/dependency_links.txt
pomoxis.egg-info/entry_points.txt
pomoxis.egg-info/not-zip-safe
pomoxis.egg-info/requires.txt
pomoxis.egg-info/top_level.txt
pomoxis/align/__init__.py
pomoxis/align/common.py
pomoxis/align/minimap.py
pomoxis/align/py2client.py
pomoxis/common/__init__.py
pomoxis/common/bio.py
pomoxis/common/catalogue_errors.py
pomoxis/common/common_errors_from_bam.py
pomoxis/common/coverage_from_bam.py
pomoxis/common/qscores_from_summary.py
pomoxis/common/ref_seqs_from_bam.py
pomoxis/common/simulate_calls.py
pomoxis/common/stats_from_bam.py
pomoxis/common/subsample_bam.py
pomoxis/common/summary_from_stats.py
pomoxis/common/trim_alignments.py
pomoxis/common/util.py
pomoxis/provider/__init__.py
pomoxis/provider/replayfast5.py
scripts/assess_assembly
scripts/intersect_assembly_errors
scripts/mini_align
scripts/mini_assemble