Metadata-Version: 2.4
Name: polyase
Version: 1.0.0
Summary: A package for analyzing allele-specific expression in polyploid organisms
License: MIT
License-File: LICENSE
Keywords: bioinformatics,polyploid,allele-specific,expression
Author: nadja.franziska.nolte@nib.si
Requires-Python: >=3.11,<3.13
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Provides-Extra: dev
Provides-Extra: docs
Requires-Dist: anndata (>=0.12.6,<0.13.0)
Requires-Dist: bluepy (>=1.3.0) ; extra == "docs"
Requires-Dist: h5py (>=3.15.1,<4.0.0)
Requires-Dist: isotools (==0.3.4)
Requires-Dist: matplotlib (>=3.10.7,<4.0.0)
Requires-Dist: nbsphinx ; extra == "docs"
Requires-Dist: numpy (>=2.3.4,<3.0.0)
Requires-Dist: numpy (>=2.3.4,<3.0.0) ; extra == "dev"
Requires-Dist: pandas (>=2.3.3,<3.0.0)
Requires-Dist: plotly (==5.24.1)
Requires-Dist: pytest (>=9.0.0,<10.0.0) ; extra == "dev"
Requires-Dist: rnapysoforms (>=1.3.1,<2.0.0)
Requires-Dist: scipy (>=1.16.3,<2.0.0)
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Requires-Dist: sphinx-rtd-theme ; extra == "docs"
Project-URL: Homepage, https://polyase.readthedocs.io/en/latest/
Project-URL: Issues, https://github.com/nadjano/polyase/issues
Project-URL: Repository, https://github.com/nadjano/polyase
Description-Content-Type: text/markdown


![potatoesaregreat](polyase_diagramm.png)
# Polyase

A Python package for analyzing allele-specific expression in polyploid organisms.


## Installation

You can install polyase using pip:
pip install polyase


Pyranges must be installed manually for reading GTF files.



