tqdm
loguru
typer
pyyaml
pydantic>=2
pydantic-settings>=2
authlib
httpx
tenacity
filelock
numpy<2
pandas
scipy
scikit-learn
seaborn
datamol>=0.12.1
fastpdb
zarr
pyarrow<18
fsspec[http]
yaspin
typing-extensions>=4.12.0
boto3>=1.35.0

[dev]
pytest
pytest-xdist
pytest-cov
ruff
jupyterlab
ipywidgets
moto[s3]>=5.0.14

[doc]
mkdocs
mkdocs-material>=9.4.7
mkdocstrings
mkdocstrings-python
mkdocs-jupyter
markdown-include
mdx_truly_sane_lists
nbconvert
mike>=1.0.0
