Metadata-Version: 2.1
Name: pointcyto
Version: 0.0.9
Summary: Add a short description here!
Home-page: https://github.com/pyscaffold/pyscaffold/
Author: gunthergl
Author-email: gunthergl@gmx.net
License: MIT
Project-URL: Documentation, https://pyscaffold.org/
Platform: any
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python
Description-Content-Type: text/x-rst; charset=UTF-8
License-File: LICENSE.txt
Requires-Dist: importlib-metadata; python_version < "3.8"
Requires-Dist: torch
Requires-Dist: torch_geometric
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Requires-Dist: pyarrow; extra == "testing"

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|

=========
pointcyto
=========


    Cytometry data as point cloud representation for use with `pytorch <https://github.com/pytorch/pytorch>`_ and `pytorch_geometric <https://github.com/pyg-team/pytorch_geometric>`_.


A longer description of your project goes here...



Package setup
=============

This project has been set up using PyScaffold 4.5. For details and usage
information on PyScaffold see https://pyscaffold.org/.

.. code-block:: bash

    pip install pyscaffold
    putup pointcyto
    cd pointcyto
    # Create pointcyto within gitlab, without README
    git branch -m master main
    git remote add origin git@git.uni-regensburg.de:ggrlab/pointcyto.git
    git push --set-upstream origin --all
    git push --set-upstream origin --tags
    conda create -y -n conda_pointcyto python=3.10
    conda activate conda_pointcyto
    # Select conda_nbnode as default python interpreter in VsCode
    #   select a single python file, then on the bottom right, the current python interpreter name
    #   pops up. Click on it and select the "conda_nbnode" interpreter.
    # Make sure that the correct pip is used:
    #   Something like: /home/gugl/.conda_envs/conda_pointcyto/bin/pip
    which pip
    pip install tox
    tox --help

    # Have a clean git, then add "gitlab-CI" with pyscaffold
    putup --update . --gitlab
    putup --update . --github

    # Add pre-commit hooks
    pip install pre-commit
    pre-commit autoupdate

    # Documentation
    # To use gitlab-pages, you need to place the created htmls in the "public/" directory
    # as artifact within the gitlab-ci.yml file.
    # Right now, it is created within: .gitlab-ci.yml//docs
