numpy==2.2.1
torch==2.5.1
pycoverm==0.6.2
networkx==3.4.2
scikit-learn==1.6.0
dadaptation==3.2
loguru==0.7.3
pyhmmer==0.10.15
pyrodigal==3.6.3
pandas==2.2.3
rich-click==1.8.3
click<8.2.0
loguru==0.7.3
tabulate==0.9.0

[docs]
sphinx
sphinx-book-theme
myst-nb
ipywidgets
sphinx-new-tab-link!=0.2.2
