Metadata-Version: 2.2
Name: pipemake
Version: 1.2.0
Summary: Pipemake: A pipeline creation tool using Snakemake
Home-page: https://github.com/kocherlab/pipemake
License: MIT
Project-URL: Documentation, https://pipemake.readthedocs.io/en/latest/
Project-URL: Code, https://github.com/kocherlab/pipemake
Project-URL: Issue tracker, https://github.com/kocherlab/pipemake/issues
Requires-Python: >=3.7
Description-Content-Type: text/x-rst
License-File: LICENSE
Requires-Dist: snakemake
Requires-Dist: pandas
Dynamic: description
Dynamic: description-content-type
Dynamic: home-page
Dynamic: license
Dynamic: project-url
Dynamic: requires-dist
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   :target: https://codecov.io/gh/kocherlab/pipemake
   :alt: Coverage

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   :target: https://anaconda.org/kocherlab/pipemake

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   :target: https://github.com/kocherlab/pipemake/blob/main/LICENSE

********
Pipemake
********
Pipemake is a lightweight, flexible, and easy-to-use tool for creating and managing `Snakemake <https://snakemake.readthedocs.i/>`_ pipelines. It was designed with two primary goals: 

1. Provide a collection of pre-built and easy to modify bioinformatic pipelines with an enphasis on genomics and social behavior analysis
2. Provide a user-friendly interface for creating and managing pipelines with minimal programming experience

================
Getting Pipemake
================
-----
Mamba
-----

.. code-block:: bash

    conda install -n base -c conda-forge mamba
    mamba create -c conda-forge -c bioconda -c kocherlab -n pipemake pipemake

======
Issues
======

1. Check the `docs <https://pipemake.rtfd.io/>`_.
2. Search the `issues on GitHub <https://github.com/kocherlab/pipemake/issues>`_ or open a new one.

=======
License
=======

Pipemake is licensed under the MIT license. See the `LICENSE <https://github.com/kocherlab/pipemake/blob/main/LICENSE>`_ file for details.
