LICENSE.txt
MANIFEST.in
README.rst
setup.py
PhySpeTree.egg-info/PKG-INFO
PhySpeTree.egg-info/SOURCES.txt
PhySpeTree.egg-info/dependency_links.txt
PhySpeTree.egg-info/entry_points.txt
PhySpeTree.egg-info/top_level.txt
physpetool/__init__.py
physpetool/version.py
physpetool/convert/__init__.py
physpetool/convert/concatenate.py
physpetool/convert/fasta2phy.py
physpetool/database/KEGG_DB_3.0.db
physpetool/database/__init__.py
physpetool/database/dbpath.py
physpetool/database/kegg_to_silva_id.txt
physpetool/database/koindex.db
physpetool/database/organism.txt
physpetool/database/organism_kegg_to_tax.txt
physpetool/database/proindex.db
physpetool/database/protein_ko.txt
physpetool/database/silva.txt
physpetool/database/support_hcp_organism.txt
physpetool/database/support_srna_organism.txt
physpetool/phylotree/__init__.py
physpetool/phylotree/buildtree.py
physpetool/phylotree/consensustree.py
physpetool/phylotree/doclustalw.py
physpetool/phylotree/dofasttree.py
physpetool/phylotree/dogblocks.py
physpetool/phylotree/doiqtree.py
physpetool/phylotree/domafft.py
physpetool/phylotree/domuscle.py
physpetool/phylotree/doraxml.py
physpetool/phylotree/dotrimal.py
physpetool/phylotree/log.py
physpetool/phylotree/retrieveprotein.py
physpetool/phylotree/retrievessurna.py
physpetool/physpe/__init__.py
physpetool/physpe/autobuild.py
physpetool/physpe/build.py
physpetool/physpe/check.py
physpetool/physpe/combine.py
physpetool/physpe/iview.py
physpetool/physpe/physpe.py
physpetool/softwares/FastTree
physpetool/softwares/FastTreeMP
physpetool/softwares/Gblocks
physpetool/softwares/__init__.py
physpetool/softwares/astral.5.6.3.jar
physpetool/softwares/clustalw2
physpetool/softwares/iqtree
physpetool/softwares/mafft
physpetool/softwares/muscle
physpetool/softwares/path.py
physpetool/softwares/raxmlHPC-PTHREADS-AVX2
physpetool/softwares/spr_supertree
physpetool/softwares/trimal
physpetool/softwares/lib/JSAP-2.1.jar
physpetool/softwares/lib/colt.jar
physpetool/softwares/lib/libJOCL_2_0_0-apple-x86_64.dylib
physpetool/softwares/lib/main.jar
physpetool/tools/__init__.py
physpetool/tools/concate16sdb.py
physpetool/tools/create_local_HCP_db.py
physpetool/tools/created16sdb.py
physpetool/tools/createproindex.py
physpetool/tools/dealwithSILVAdata.py
physpetool/tools/download_d_seq.py
physpetool/tools/insertproindex.py
physpetool/tools/kegg_index_db.py
physpetool/tools/keggabb_to_ncibtax.py
physpetool/tools/keggapi.py
physpetool/tools/operateDB.py
physpetool/tools/protein31kodb.py
physpetool/tools/server_combine.py
physpetool/tools/tem.py
physpetool/utils/__init__.py
physpetool/utils/checkIsNum.py
physpetool/utils/checkdb.py
physpetool/utils/checkinputfile.py
physpetool/utils/colorconvert.py
physpetool/utils/outdirforamt.py
physpetool/utils/printstyle.py
physpetool/view/__init__.py
physpetool/view/annotatingtree.py
physpetool/view/changelabels.py