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MANIFEST.in
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requirements.txt
setup.cfg
setup.py
.github/dependabot.yml
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/deploy_documentation.yml
.github/workflows/deploy_to_pypi.yml
.github/workflows/lintandtest.yml
.github/workflows/update_documentation.yml
documentation/README.md
documentation/mkdocs.yml
documentation/docs/extending_photonai_graph.md
documentation/docs/getting_started.md
documentation/docs/index.md
documentation/docs/installation.md
documentation/docs/workflow.md
documentation/docs/api/dynamic_utils.md
documentation/docs/api/graph_construction.md
documentation/docs/api/graph_controllability.md
documentation/docs/api/graph_conversions.md
documentation/docs/api/graph_convnets.md
documentation/docs/api/graph_embeddings.md
documentation/docs/api/graph_kernels.md
documentation/docs/api/graph_measures.md
documentation/docs/api/graph_utilities.md
documentation/docs/api/introduction.md
documentation/docs/api/population_averaging.md
documentation/docs/assets/fonts/Roboto/LICENSE.txt
documentation/docs/assets/fonts/Roboto/Roboto-Regular.ttf
documentation/docs/assets/fonts/Space_Mono/OFL.txt
documentation/docs/assets/fonts/Space_Mono/SpaceMono-Regular.ttf
documentation/docs/assets/img/photonai-01.png
documentation/docs/assets/img/photonai-02.png
documentation/docs/assets/img/visualization_brain_edge_t.png
documentation/docs/assets/javascript/mathjax.js
documentation/docs/assets/stylesheets/fonts.css
documentation/docs/assets/stylesheets/material.css
documentation/docs/examples/GraphEmbedding_lem_example.ipynb
documentation/docs/examples/GraphEmbedding_lle_example.ipynb
documentation/docs/examples/GraphKernel_PyramidMatch_example.ipynb
documentation/docs/examples/GraphKernel_SVMtheta_example.ipynb
documentation/docs/examples/GraphLitmusTest.ipynb
documentation/docs/examples/GraphMeasure_extraction_example.ipynb
documentation/docs/examples/GraphMeasure_pipeline_example.ipynb
documentation/docs/examples/GraphNN_classification_example.ipynb
documentation/docs/examples/GraphNN_regression_example.ipynb
documentation/docs/examples/Networkx_Dataset.py
documentation/docs/examples/networkx_pipeline.ipynb
documentation/material-theme/LICENSE
examples/LitmusTest/GraphLitmusTest.ipynb
examples/LitmusTest/Networkx_Dataset.py
examples/constructor_examples/GraphConstructor_spatial_ho_example.ipynb
examples/constructor_examples/GraphConstructor_spatial_individual_example.ipynb
examples/embeding_examples/GraphEmbedding_lem_example.ipynb
examples/embeding_examples/GraphEmbedding_lle_example.ipynb
examples/gcn_examples/GraphNN_classification_example.ipynb
examples/gcn_examples/GraphNN_regression_example.ipynb
examples/kernel_examples/GraphKernel_PyramidMatch_example.ipynb
examples/kernel_examples/GraphKernel_SVMtheta_example.ipynb
examples/measure_examples/GraphMeasure_extraction_example.ipynb
examples/measure_examples/GraphMeasure_pipeline_example.ipynb
examples/networkx_example/networkx_pipeline.ipynb
photonai_graph/GraphConversions.py
photonai_graph/GraphMeasures.json
photonai_graph/GraphUtilities.py
photonai_graph/IgraphMeasures.json
photonai_graph/PopulationAveragingTransform.py
photonai_graph/__init__.py
photonai_graph/photonai_graph.json
photonai_graph/util.py
photonai_graph/version.py
photonai_graph.egg-info/PKG-INFO
photonai_graph.egg-info/SOURCES.txt
photonai_graph.egg-info/dependency_links.txt
photonai_graph.egg-info/not-zip-safe
photonai_graph.egg-info/pbr.json
photonai_graph.egg-info/requires.txt
photonai_graph.egg-info/top_level.txt
photonai_graph/Controllability/__init__.py
photonai_graph/Controllability/controllability_functions.py
photonai_graph/Controllability/controllability_measures.py
photonai_graph/DynamicUtils/__init__.py
photonai_graph/DynamicUtils/cofluct_functions.py
photonai_graph/DynamicUtils/cofluct_transform.py
photonai_graph/GraphConstruction/__init__.py
photonai_graph/GraphConstruction/graph_constructor.py
photonai_graph/GraphConstruction/graph_constructor_knn.py
photonai_graph/GraphConstruction/graph_constructor_percentage.py
photonai_graph/GraphConstruction/graph_constructor_percentage_window.py
photonai_graph/GraphConstruction/graph_constructor_random_walks.py
photonai_graph/GraphConstruction/graph_constructor_spatial.py
photonai_graph/GraphConstruction/graph_constructor_threshold.py
photonai_graph/GraphConstruction/graph_constructor_threshold_window.py
photonai_graph/GraphConstruction/ho_coords.csv
photonai_graph/GraphEmbedding/__init__.py
photonai_graph/GraphEmbedding/graph_embedding_base.py
photonai_graph/GraphEmbedding/graph_embedding_hope.py
photonai_graph/GraphEmbedding/graph_embedding_laplacian_eigenmaps.py
photonai_graph/GraphEmbedding/graph_embedding_locally_linear_embedding.py
photonai_graph/GraphKernels/GrakelTransformer.py
photonai_graph/GraphKernels/__init__.py
photonai_graph/GraphKernels/grakel_adapter.py
photonai_graph/Measures/AbstractMeasureTransform.py
photonai_graph/Measures/IgraphMeasureTransform.py
photonai_graph/Measures/MeasureAdapter.py
photonai_graph/Measures/NetworkxMeasureTransform.py
photonai_graph/Measures/__init__.py
photonai_graph/NeuralNets/GATModel.py
photonai_graph/NeuralNets/GCNModel.py
photonai_graph/NeuralNets/NNUtilities.py
photonai_graph/NeuralNets/SGCModel.py
photonai_graph/NeuralNets/__init__.py
photonai_graph/NeuralNets/dgl_base.py
test/__init__.py
test/constructor_tests/__init__.py
test/constructor_tests/ho_coords.csv
test/constructor_tests/test_graph_constructor_base.py
test/constructor_tests/test_graph_constructor_knn.py
test/constructor_tests/test_graph_constructor_percentage.py
test/constructor_tests/test_graph_constructor_percentage_window.py
test/constructor_tests/test_graph_constructor_random_walk.py
test/constructor_tests/test_graph_constructor_spatial.py
test/constructor_tests/test_graph_constructor_threshold.py
test/constructor_tests/test_graph_constructor_threshold_window.py
test/controllability_tests/X_test.npz
test/controllability_tests/__init__.py
test/controllability_tests/test.csv
test/controllability_tests/test_controllability_functions_average_controllability.py
test/controllability_tests/test_controllability_functions_modal_controllability.py
test/controllability_tests/test_controllability_measure_transform.py
test/conversion_tests/__init__.py
test/conversion_tests/test_dense_to_dgl.py
test/conversion_tests/test_dense_to_igraph.py
test/conversion_tests/test_dgl.py
test/conversion_tests/test_dgl_to_dense.py
test/conversion_tests/test_dgl_to_sparse.py
test/conversion_tests/test_sparse_to_dense.py
test/dynamic_util_tests/__init__.py
test/dynamic_util_tests/test_cofluct_function.py
test/dynamic_util_tests/test_cofluct_transform.py
test/embedding_tests/__init__.py
test/embedding_tests/test_graph_embedding_hope.py
test/embedding_tests/test_graph_embedding_laplacian_eigenmaps.py
test/embedding_tests/test_graph_embedding_locally_linear_embedding.py
test/kernel_tests/__init__.py
test/kernel_tests/test_grakel_adapter.py
test/kernel_tests/test_grakel_transformer.py
test/measure_tests/X_test.npz
test/measure_tests/__init__.py
test/measure_tests/test_igraph_transform.py
test/measure_tests/test_measure_adapter.py
test/measure_tests/test_measure_transform.py
test/nn_tests/__init__.py
test/nn_tests/test_gat_classifier.py
test/nn_tests/test_gat_regressor.py
test/nn_tests/test_gcn_classifier.py
test/nn_tests/test_gcn_regressor.py
test/nn_tests/test_sgc_classifier.py
test/nn_tests/test_sgc_regressor.py
test/population_averaging_tests/__init__.py
test/population_averaging_tests/test_population_averaging.py
test/utility_tests/__init__.py
test/utility_tests/test_asteroidal.py
test/utility_tests/test_draw_connectivity_matrix.py
test/utility_tests/test_draw_connectogram.py
test/utility_tests/test_draw_connectograms.py
test/utility_tests/test_get_random_connectivity_data.py
test/utility_tests/test_get_random_labels.py
test/utility_tests/test_individual_fishertransform.py
test/utility_tests/test_individual_ztransform.py
test/utility_tests/test_pydot_to_nx.py
test/utility_tests/test_visualize_networkx.py