LICENSE
NOTICE.md
README.md
pyproject.toml
src/phospy/__init__.py
src/phospy/activities.py
src/phospy/analysis.py
src/phospy/cli.py
src/phospy/constants.py
src/phospy/core_processing.py
src/phospy/dataset.py
src/phospy/dataset_loader.py
src/phospy/dataset_preprocessing.py
src/phospy/dataset_schema.py
src/phospy/dataset_site_matrix.py
src/phospy/io.py
src/phospy/matrices.py
src/phospy/motifs.py
src/phospy/pipeline.py
src/phospy/preprocessing.py
src/phospy/preprocessing_services.py
src/phospy/profiles.py
src/phospy/publishing.py
src/phospy/scoring.py
src/phospy/site_matrix_builder.py
src/phospy/types.py
src/phospy/workflow.py
src/phospy/writers.py
src/phospy.egg-info/PKG-INFO
src/phospy.egg-info/SOURCES.txt
src/phospy.egg-info/dependency_links.txt
src/phospy.egg-info/entry_points.txt
src/phospy.egg-info/requires.txt
src/phospy.egg-info/top_level.txt
src/phospy/prediction/__init__.py
src/phospy/prediction/aggregation.py
src/phospy/prediction/candidates.py
src/phospy/prediction/execution.py
src/phospy/prediction/models.py
src/phospy/prediction/sampling.py
src/phospy/prediction/sampling_core.py
src/phospy/prediction/sampling_runtime.py
src/phospy/prediction/sampling_trace_writer.py
src/phospy/prediction/service.py
src/phospy/prediction/svm.py
src/phospy/prediction/trace_export.py
src/phospy/prediction/trace_replay.py
src/phospy/prediction/trace_runtime.py
src/phospy/prediction/traces.py
src/phospy/prediction/validation.py
src/phospy/validation/__init__.py
src/phospy/validation/compatibility.py
src/phospy/validation/errors.py
src/phospy/validation/normalization.py
src/phospy/validation/paths.py
src/phospy/validation/primitives.py
src/phospy/validation/requests.py
src/phospy/validation/tables.py
tests/test_activities.py
tests/test_analysis.py
tests/test_dataset_schema.py
tests/test_domain_validation_errors.py
tests/test_fragile_support_reference.py
tests/test_matrices.py
tests/test_motifs.py
tests/test_parity-with_metrics.py
tests/test_parity.py
tests/test_pipeline_publishing.py
tests/test_prediction.py
tests/test_prediction_components.py
tests/test_preprocessing.py
tests/test_profiles.py
tests/test_public_api.py
tests/test_readme_smoke.py
tests/test_reference_workflow_seams.py
tests/test_scoring.py
tests/test_validation_compatibility.py
tests/test_validation_requests.py
tests/test_validation_tables.py
tests/test_workflow.py