README.md
setup.cfg
setup.py
phigaro/__init__.py
phigaro/_version.py
phigaro/const.py
phigaro/context.py
phigaro/data.py
phigaro/helper.py
phigaro/pvogs_taxonomy.pickle
phigaro.egg-info/PKG-INFO
phigaro.egg-info/SOURCES.txt
phigaro.egg-info/dependency_links.txt
phigaro.egg-info/entry_points.txt
phigaro.egg-info/requires.txt
phigaro.egg-info/top_level.txt
phigaro/batch/__init__.py
phigaro/batch/path.py
phigaro/batch/runner.py
phigaro/batch/task/__init__.py
phigaro/batch/task/base.py
phigaro/batch/task/dummy.py
phigaro/batch/task/gene_mark.py
phigaro/batch/task/hmmer.py
phigaro/batch/task/parse_hmmer.py
phigaro/batch/task/path.py
phigaro/batch/task/preprocess.py
phigaro/batch/task/prodigal.py
phigaro/batch/task/run_phigaro.py
phigaro/cli/__init__.py
phigaro/cli/batch.py
phigaro/cli/helper.py
phigaro/cli/phigaro.py
phigaro/finder/__init__.py
phigaro/finder/base.py
phigaro/finder/v1.py
phigaro/finder/v2.py
phigaro/misc/__init__.py
phigaro/misc/ranges.py
phigaro/misc/vis.py
phigaro/to_html/__init__.py
phigaro/to_html/html_formation.py
phigaro/to_html/html_templates.py
phigaro/to_html/preprocess.py
phigaro/to_html/pvogs_annotations.pickle