.gitignore
LICENSE
README.md
requirements.txt
setup.py
.github/workflows/python-app.yml
.vscode/launch.json
PhenoGraph.egg-info/PKG-INFO
PhenoGraph.egg-info/SOURCES.txt
PhenoGraph.egg-info/dependency_links.txt
PhenoGraph.egg-info/not-zip-safe
PhenoGraph.egg-info/requires.txt
PhenoGraph.egg-info/top_level.txt
examples/example-using-random-data-points.ipynb
examples/tutorial_pbmc3k.ipynb
examples/data/RB_genes_human.txt
examples/data/filtered_gene_bc_matrices/hg19/barcodes.tsv
examples/data/filtered_gene_bc_matrices/hg19/genes.tsv
examples/data/filtered_gene_bc_matrices/hg19/matrix.mtx
phenograph/__init__.py
phenograph/bruteforce_nn.py
phenograph/classify.py
phenograph/cluster.py
phenograph/core.py
phenograph/version.py
phenograph/louvain/community
phenograph/louvain/community.exe
phenograph/louvain/convert
phenograph/louvain/convert.exe
phenograph/louvain/hierarchy
phenograph/louvain/hierarchy.exe
phenograph/louvain/linux-community
phenograph/louvain/linux-convert
phenograph/louvain/linux-hierarchy
phenograph/louvain/louvain-readme.txt
phenograph/louvain/phenograph-readme.txt
tests/__init__.py
tests/conftest.py
tests/test_classify.py
tests/test_cluster.py
tests/test_core.py